RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 ZNF681Q96N22 645 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 DPH1Q9BZG8 443 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 POLR2J2Q9GZM3 115 aaKnown RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 PITHD1Q9GZP4 211 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 C8orf33Q9H7E9 229 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 GPN2Q9H9Y4 310 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 LYARQ9NX58 379 aaKnown RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 NLGN3Q9NZ94 848 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 USP36Q9P275 1121 aaKnown RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 FTSJ1Q9UET6 329 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 MGAT4BQ9UQ53 548 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 WBP11Q9Y2W2 641 aaKnown RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 CAB39Q9Y376 341 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 MED12Q93074 2177 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 KIAA1549LQ6ZVL6 1849 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 SPTY2D1-AS1A0A0U1RR47 76 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 ZC3H12DA2A288 527 aaKnown RBP5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 ZAR1LA6NP61 321 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 CLDN25C9JDP6 229 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 SLC22A1O15245 554 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 TBX1O43435 398 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 LGI1O95970 557 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 MAOAP21397 527 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 AZGP1P25311 298 aaKnown RBP5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 GIPRP48546 466 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 TRA2BP62995 288 aaKnown RBP5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 BTG2P78543 158 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 DAB2P98082 770 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 GNA13Q14344 377 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 LARS2Q15031 903 aaKnown RBP5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 MOGQ16653 247 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 NDUFAF6Q330K2 333 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 INAVAQ3KP66 663 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 ZNF770Q6IQ21 691 aaPredicted RBP5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 POMZP3Q6PJE2 187 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 DGAT2L6Q6ZPD8 337 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 SLC30A8Q8IWU4 369 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 NATD1Q8N6N6 113 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 DENND6BQ8NEG7 585 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 OR9Q1Q8NGQ5 310 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 SMAP2Q8WU79 429 aaPredicted RBP5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 KLHL6Q8WZ60 621 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 HTRA1Q92743 480 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 ZNF566Q969W8 418 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 SH3YL1Q96HL8 342 aaPredicted RBP5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 HSPA12BQ96MM6 686 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 PTCHD1Q96NR3 888 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 MS4A4EQ96PG1 132 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 SERINC2Q96SA4 455 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 LRRC61Q9BV99 259 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 TTYH1Q9H313 450 aaPredicted RBP5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 MED20Q9H944 212 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 ANKHQ9HCJ1 492 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 ATP13A2Q9NQ11 1180 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 MAN2C1Q9NTJ4 1040 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 PHF11Q9UIL8 331 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 ZNF229Q9UJW7 825 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 YARS2Q9Y2Z4 477 aaKnown RBP5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 IFT52Q9Y366 437 aa5.65□□□□□ -1.51
TNFSF4-201ENST00000281834 FANCMQ8IYD8 2048 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 A0A0G2JPF8 293 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 HNRNPCL2B2RXH8 293 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 HNRNPCL3B7ZW38 293 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 KCNJ13O60928 360 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 HNRNPCL4P0DMR1 293 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 ACP2P11117 423 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 TEAD1P28347 426 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 GTF2E2P29084 291 aaKnown RBP5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 FRKP42685 505 aaPredicted RBP5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 SLC9A3P48764 834 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 RGS6P49758 472 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 SMIM11AP58511 58 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 MRPL2Q5T653 305 aaKnown RBP5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 KIAA0895LQ68EN5 471 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 SHISA6Q6ZSJ9 500 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 TRIM69Q86WT6 500 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 ZNF655Q8N720 491 aaPredicted RBP5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 OR52R1Q8NGF1 315 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 FNDC8Q8TC99 324 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 FBLIM1Q8WUP2 373 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 APOBEC4Q8WW27 367 aaKnown RBP5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 GATAD2BQ8WXI9 593 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 DTNBP1Q96EV8 351 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 PRRC1Q96M27 445 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 HMG20AQ9NP66 347 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 SNTG1Q9NSN8 517 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 CHCHD3Q9NX63 227 aaKnown RBP5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 ETAA1Q9NY74 926 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 REV1Q9UBZ9 1251 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 OR10H1Q9Y4A9 318 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 CLCA3PQ9Y6N3 262 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 PMF1-BGLAPU3KQ54 211 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 A0A0J9YY10 115 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 A6NCN8 305 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 BOLA2-SMG1P6H3BVE0 249 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 CHST10O43529 356 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 KIAA0513O60268 411 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 RPLP0P05388 317 aaKnown RBP5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 ALOX5P09917 674 aa5.64□□□□□ -1.51
TNFSF4-201ENST00000281834 BMP4P12644 408 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms