RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 OR52W1Q6IF63 320 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 MTFR2Q6P444 385 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 CILP2Q8IUL8 1156 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 OR4Q3Q8NH05 313 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 GTPBP3Q969Y2 492 aaKnown RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 TMEM143Q96AN5 459 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 ARMC5Q96C12 935 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 FCRL5Q96RD9 977 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 SYT17Q9BSW7 474 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 NT5C1AQ9BXI3 368 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 DPY30Q9C005 99 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 TSPAN10Q9H1Z9 355 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 ATXN3LQ9H3M9 355 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 SARS2Q9NP81 518 aaKnown RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 ISYNA1Q9NPH2 558 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 NANSQ9NR45 359 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 MBD1Q9UIS9 605 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-201ENST00000274071 KCTD3Q9Y597 815 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 RAI2Q9Y5P3 530 aa8.68□□□□□ -1.02
PDGFC-201ENST00000274071 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 ZAR1LA6NP61 321 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 CXCL11O14625 94 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 HOXC6P09630 235 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 SAGP10523 405 aaPredicted RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 HSD3B1P14060 373 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 TYRP14679 529 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 RCC1P18754 421 aaPredicted RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 CRABP1P29762 137 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 IRS1P35568 1242 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 MVDP53602 400 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 ERVPABLB-1P60509 514 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 PLA2G7Q13093 441 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 SNTB2Q13425 540 aaKnown RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 BOP1Q14137 746 aaKnown RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 INSL4Q14641 139 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 OR8G1Q15617 311 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 VMACQ2NL98 169 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 DEFB115Q30KQ5 88 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 SLC10A6Q3KNW5 377 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 RNASE12Q5GAN4 147 aaKnown RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 LRIF1Q5T3J3 769 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 OR2G6Q5TZ20 316 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 RNLSQ5VYX0 342 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 HEPHL1Q6MZM0 1159 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 SLC30A6Q6NXT4 461 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 FAM111BQ6SJ93 734 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 BAIAP2L2Q6UXY1 529 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 WDR53Q7Z5U6 358 aaPredicted RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 OAFQ86UD1 273 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 LRRC28Q86X40 367 aaPredicted RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 PRSS58Q8IYP2 241 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 CFAP206Q8IYR0 622 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 LGI4Q8N135 537 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 OR11G2Q8NGC1 345 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 OR1S2Q8NGQ3 325 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 GPR61Q9BZJ8 451 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 FAM117AQ9C073 453 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 PCTPQ9UKL6 214 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 FNDC3AQ9Y2H6 1198 aaKnown RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 OR6C76A6NM76 312 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 GFYI3L273 518 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 AP4M1O00189 453 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 EIF4E2O60573 245 aaKnown RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 KCNK5O95279 499 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 IGHA2P01877 340 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 C6P13671 934 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 ZNF35P13682 527 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 ZNF14P17017 642 aaPredicted RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 EDNRBP24530 442 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 RPL38P63173 70 aaKnown RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 SRSF3P84103 164 aaKnown RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 TPBGQ13641 420 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 TRAM1Q15629 374 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 USF2Q15853 346 aaPredicted RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 TTLL9Q3SXZ7 439 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 TMEM71Q6P5X7 295 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 CD200R1LQ6Q8B3 271 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 IL20RBQ6UXL0 311 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 NPWQ8N729 165 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 FAM46DQ8NEK8 389 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 OR6B3Q8NGW1 331 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 NEIL3Q8TAT5 605 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 CD99L2Q8TCZ2 262 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 HIST1H2BAQ96A08 127 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 RAB3CQ96E17 227 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 ZFP42Q96MM3 310 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 ATG101Q9BSB4 218 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 LHX9Q9NQ69 397 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 FLRT1Q9NZU1 646 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 LOC285556D6RIA3 1793 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 TMEM238LA0A1B0GVL6 79 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 MBTPS2O43462 519 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 WNT1P04628 370 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 RNH1P13489 461 aaKnown RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 CRYBA2P53672 197 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 OC90Q02509 493 aaPredicted RBP8.67□□□□□ -1.02
PDGFC-201ENST00000274071 SREBF2Q12772 1141 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 ABRAXAS2Q15018 415 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 IDNKQ5T6J7 187 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 HACD4Q5VWC8 232 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms