RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CDH16O75309 829 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 REM1O75628 298 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 GOSR1O95249 250 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 LY6G6DO95868 133 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 OTCP00480 354 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 DRD2P14416 443 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 CPOXP36551 454 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 FOXA1P55317 472 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 ETF1P62495 437 aaKnown RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 TRA2BP62995 288 aaKnown RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 NKX6-1P78426 367 aaPredicted RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 CLCQ05315 142 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 ZNF678Q5SXM1 525 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 C10orf62Q5T681 223 aaPredicted RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 APOOLQ6UXV4 268 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 BIVMQ86UB2 503 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 NOA1Q8NC60 698 aaKnown RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 OR2M3Q8NG83 312 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 OR5M1Q8NGP8 315 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 UHMK1Q8TAS1 419 aaKnown RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.07□□□□□ -1.122e-8■■■■□ 26.5
TPM3-201ENST00000271850 C16orf78Q8WTQ4 265 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 EDARADDQ8WWZ3 215 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 EXOSC8Q96B26 276 aaKnown RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 LRRC46Q96FV0 321 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 ZNF845Q96IR2 970 aaPredicted RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 SFXN2Q96NB2 322 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 TM9SF2Q99805 663 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 MRPL57Q9BQC6 102 aaKnown RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 EBPLQ9BY08 206 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 MRPL46Q9H2W6 279 aaKnown RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 TNFRSF12AQ9NP84 129 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 BEX4Q9NWD9 120 aaPredicted RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 KLHL28Q9NXS3 571 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 AHSPQ9NZD4 102 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 TMEM216Q9P0N5 145 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 VPS29Q9UBQ0 182 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 PRODH2Q9UF12 536 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 PACSIN3Q9UKS6 424 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 CFL2Q9Y281 166 aa8.07□□□□□ -1.12
TPM3-201ENST00000271850 MRPS18CQ9Y3D5 142 aaKnown RBP8.07□□□□□ -1.12
TPM3-201ENST00000271850 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.07□□□□□ -1.12
TPM3-201ENST00000271850 TRIM64A6NGJ6 449 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 TRIM64BA6NI03 449 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 SCO2O43819 266 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 PCDH7O60245 1069 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 PLOD3O60568 738 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 SMIM24O75264 130 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 IGKV1D-16P01601 117 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 HEXAP06865 529 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 THBDP07204 575 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 COL6A2P12110 1019 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 CRYGSP22914 178 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 CHMP24386 653 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 DPP4P27487 766 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 CASQ1P31415 396 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 TIA1P31483 386 aaKnown RBP eCLIP8.06□□□□□ -1.12
TPM3-201ENST00000271850 EVI2BP34910 448 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 DEKP35659 375 aaKnown RBP8.06□□□□□ -1.12
TPM3-201ENST00000271850 CPA2P48052 419 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 CLDN20P56880 219 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 SF3B4Q15427 424 aaKnown RBP eCLIP8.06□□□□□ -1.121e-13■■□□□ 12.6
TPM3-201ENST00000271850 TMEM44Q2T9K0 475 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 TSNAXIP1Q2TAA8 658 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 Q5PR19 223 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 C6orf163Q5TEZ5 329 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 FBXW10Q5XX13 1052 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 SCIMPQ6UWF3 145 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 ENPP6Q6UWR7 440 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 CLEC9AQ6UXN8 241 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 LARP4Q71RC2 724 aaKnown RBP eCLIP8.06□□□□□ -1.121e-8■□□□□ 9.3
TPM3-201ENST00000271850 ZNF550Q7Z398 422 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 GRAMD2AQ8IUY3 354 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 GOLGA6L1Q8N7Z2 621 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 ZNF592Q92610 1267 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 ZNF382Q96SR6 550 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 MDFIQ99750 246 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 PIGMQ9H3S5 423 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 DSN1Q9H410 356 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 RNF122Q9H9V4 155 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 NEUROD4Q9HD90 331 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 MED11Q9P086 117 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 ZNF180Q9UJW8 692 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 SNX6Q9UNH7 406 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 ZNF337Q9Y3M9 751 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 TIMM22Q9Y584 194 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 HEATR5AQ86XA9 2040 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 USF3Q68DE3 2245 aa8.06□□□□□ -1.12
TPM3-201ENST00000271850 OR2M5A3KFT3 312 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 MYO1GB0I1T2 1018 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 POC1B-GALNT4F8VUJ3 575 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 H7C1Q1 480 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 UPK1AO00322 258 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 GUCY1B2O75343 617 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 AQP8O94778 261 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 INHBAP08476 426 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 HSD3B1P14060 373 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 HSD3B2P26439 372 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 UGT2B10P36537 528 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 CD79BP40259 229 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms