RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TMPRSS12Q86WS5 348 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 VRK3Q8IV63 474 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 L3MBTL4Q8NA19 623 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 PAPD5Q8NDF8 572 aaKnown RBP13.2□□□□□ -0.3
CDH3-201ENST00000264012 PMM1Q92871 262 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 PHOX2BQ99453 314 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 NDUFB2O95178 105 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 HBQ1P09105 142 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 GNAO1P09471 354 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 HOXA9P31269 272 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 PER3P56645 1201 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 GK3PQ14409 553 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 SLCO4C1Q6ZQN7 724 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 CPOQ8IVL8 374 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 MS4A15Q8N5U1 240 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 CDS1Q92903 461 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 BEX2Q9BXY8 128 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 BEX1Q9HBH7 125 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 DHDHQ9UQ10 334 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 NOX1Q9Y5S8 564 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 NPIPA5A0A0B4J1W7 369 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 NPIPA7E9PJI5 369 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 INMT-MINDY4F8WBC2 141 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 PPP1R3DO95685 299 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 MMP2P08253 660 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 NPIPA8P0DM63 369 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 STOMP27105 288 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 CD6P30203 668 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 ADH7P40394 386 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 DPP6P42658 865 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 RBM34P42696 430 aaKnown RBP13.2□□□□□ -0.3
CDH3-201ENST00000264012 OR2L8Q8NGY9 312 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 CCDC115Q96NT0 180 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 POLE4Q9NR33 117 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 FARSAQ9Y285 508 aaKnown RBP13.2□□□□□ -0.3
CDH3-201ENST00000264012 MAGEA12P43365 314 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 CXCL12P48061 93 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 PRKCDQ05655 676 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 WDR53Q7Z5U6 358 aaPredicted RBP13.2□□□□□ -0.3
CDH3-201ENST00000264012 OR51L1Q8NGJ5 315 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 CPPED1Q9BRF8 314 aaPredicted RBP13.2□□□□□ -0.3
CDH3-201ENST00000264012 ACSS1Q9NUB1 689 aaPredicted RBP13.2□□□□□ -0.3
CDH3-201ENST00000264012 UCKL1Q9NWZ5 548 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 TAAR2Q9P1P5 351 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 ABCG2Q9UNQ0 655 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 ERVK-19Q9WJR5 959 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 RFXAPO00287 272 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 RGS9O75916 674 aaPredicted RBP13.19□□□□□ -0.3
CDH3-201ENST00000264012 SYPP08247 313 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 NUDT7P0C024 238 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 CD38P28907 300 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 BMXP51813 675 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 RPS15P62841 145 aaKnown RBP13.19□□□□□ -0.3
CDH3-201ENST00000264012 PLP2Q04941 152 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 UGT2A3Q6UWM9 527 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 Q8N402 240 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 TMEM151AQ8N4L1 468 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 CYB561A3Q8NBI2 242 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 CCDC54Q8NEL0 328 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 VN1R2Q8NFZ6 395 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 PRRC1Q96M27 445 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 ZNF224Q9NZL3 707 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 GKN3PP0CG01 181 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 MYOGP15173 224 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 GGT2P36268 569 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 HOXC5Q00444 222 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 UBQLNLQ8IYU4 475 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 ALDH16A1Q8IZ83 802 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 TMEM239Q8WW34 195 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 NCDNQ9UBB6 729 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 B4GALT7Q9UBV7 327 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 SCP2D1Q9UJQ7 156 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 PCDHGA8Q9Y5G5 932 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 TRAV6A0A075B6T7 132 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 EEF1E1O43324 174 aaKnown RBP13.19□□□□□ -0.3
CDH3-201ENST00000264012 RIDAP52758 137 aaKnown RBP13.19□□□□□ -0.3
CDH3-201ENST00000264012 DCST2Q5T1A1 773 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 TMEM207Q6UWW9 146 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 ZER1Q7Z7L7 766 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 FCAMRQ8WWV6 532 aa13.19□□□□□ -0.3
CDH3-201ENST00000264012 METTL8Q9H825 291 aaKnown RBP13.19□□□□□ -0.3
CDH3-201ENST00000264012 THAP10Q9P2Z0 257 aaPredicted RBP13.19□□□□□ -0.3
CDH3-201ENST00000264012 B4GAT1O43505 415 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 MAOBP27338 520 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 MAZP56270 477 aaKnown RBP13.18□□□□□ -0.3
CDH3-201ENST00000264012 SYPL1Q16563 259 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 UGT8Q16880 541 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 TRIM46Q7Z4K8 759 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 OR8H3Q8N146 312 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 HORMAD2Q8N7B1 307 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 INO80EQ8NBZ0 244 aaPredicted RBP13.18□□□□□ -0.3
CDH3-201ENST00000264012 ZNF740Q8NDX6 193 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 OR8J2Q8NGG1 315 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 SFXN5Q8TD22 340 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 CRB3Q9BUF7 120 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 USP22Q9UPT9 525 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 NOP16Q9Y3C1 178 aaKnown RBP13.18□□□□□ -0.3
CDH3-201ENST00000264012 M0R129 80 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 IFNA21P01568 189 aa13.18□□□□□ -0.3
CDH3-201ENST00000264012 ZDHHC11BP0C7U3 371 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms