RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 GABRG2P18507 467 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 PCGF2P35227 344 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 CRISP1P54107 249 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 ERV3-1Q14264 604 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 GK3PQ14409 553 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 EXOSC7Q15024 291 aaKnown RBP13.11□□□□□ -0.31
CDH1-201ENST00000261769 EXT1Q16394 746 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 SFT2D3Q587I9 215 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 ZNF627Q7L945 461 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 LSMEM2Q8N112 164 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 ZADH2Q8N4Q0 377 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 ZNF707Q96C28 371 aaPredicted RBP13.11□□□□□ -0.31
CDH1-201ENST00000261769 COQ10AQ96MF6 247 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 RIMS3Q9UJD0 308 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 RNF215Q9Y6U7 377 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 ECM29Q5VYK3 1845 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 HPRP00739 348 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 NKAIN1Q4KMZ8 207 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 TSSK4Q6SA08 328 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 DNAJA3Q96EY1 480 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 TMPRSS11EQ9UL52 423 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 WASF3Q9UPY6 502 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 ARNTLO00327 626 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 RETP07949 1114 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 NR4A1P22736 598 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 DAP3P51398 398 aaKnown RBP13.11□□□□□ -0.31
CDH1-201ENST00000261769 CPZQ66K79 652 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 Q6ZS52 159 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 ZNF227Q86WZ6 799 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 MISPQ8IVT2 679 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 TEX19Q8NA77 164 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 PIK3R3Q92569 461 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 NXPE2Q96DL1 559 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 ZFP3Q96NJ6 502 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 C19orf43Q9BQ61 176 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 HDHD5Q9BXW7 423 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 PIGUQ9H490 435 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 C2orf42Q9NWW7 574 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 SLC5A10A0PJK1 596 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 CTNSO60931 367 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 CDK4P11802 303 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 GLB1P16278 677 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 MAGEA3P43357 314 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 PPP2CBP62714 309 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 PPP2CAP67775 309 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 MELKQ14680 651 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 CLIP4Q8N3C7 705 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 CTRCQ99895 268 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 INPP5KQ9BT40 448 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 MS4A8Q9BY19 250 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 CST11Q9H112 138 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 PRDM9Q9NQV7 894 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 RXFP3Q9NSD7 469 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 RHBDL2Q9NX52 303 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 WSB2Q9NYS7 404 aaPredicted RBP13.1□□□□□ -0.31
CDH1-201ENST00000261769 STOML2Q9UJZ1 356 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 LRRC42Q9Y546 428 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 BRWD3Q6RI45 1802 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 ZNF749O43361 778 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 MAT1AQ00266 395 aaKnown RBP13.1□□□□□ -0.31
CDH1-201ENST00000261769 OTUD1Q5VV17 481 aaPredicted RBP13.1□□□□□ -0.31
CDH1-201ENST00000261769 GLT8D1Q68CQ7 371 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 NRMQ8IXM6 262 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 TMEM185BQ9H7F4 350 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 CENPBD1B2RD01 187 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 HSPA12AO43301 675 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 WBP4O75554 376 aaKnown RBP13.1□□□□□ -0.31
CDH1-201ENST00000261769 CAPN3P20807 821 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 CRABP1P29762 137 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 SLC19A1P41440 591 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 RIDAP52758 137 aaKnown RBP13.1□□□□□ -0.31
CDH1-201ENST00000261769 ZP2Q05996 745 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 Q7L0L9 218 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 LINGO2Q7L985 606 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 CDS1Q92903 461 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 MAL2Q969L2 176 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 DHRS1Q96LJ7 313 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 RBM24Q9BX46 236 aaKnown RBP13.1□□□□□ -0.31
CDH1-201ENST00000261769 TRIM8Q9BZR9 551 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 LRRN3Q9H3W5 708 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 NT5DC2Q9H857 520 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 NGBQ9NPG2 151 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 PLEKHM1Q9Y4G2 1056 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 CDH10Q9Y6N8 788 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 A0A1W2PPC1 479 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 GPR4P46093 362 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 CSNK1G2P78368 415 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 ABCA11PQ4W5N1 156 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 ULK3Q6PHR2 472 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 SLC46A1Q96NT5 459 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 SCGB3A2Q96PL1 93 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 COMMD3Q9UBI1 195 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 ING4Q9UNL4 249 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 MRPS2Q9Y399 296 aaKnown RBP13.1□□□□□ -0.31
CDH1-201ENST00000261769 NME7Q9Y5B8 376 aa13.1□□□□□ -0.31
CDH1-201ENST00000261769 CDK5RAP2Q96SN8 1893 aa13.09□□□□□ -0.31
CDH1-201ENST00000261769 KLRC4-KLRK1H3BQV0 150 aa13.09□□□□□ -0.31
CDH1-201ENST00000261769 K7ESM1 405 aa13.09□□□□□ -0.31
CDH1-201ENST00000261769 ARSJQ5FYB0 599 aaPredicted RBP13.09□□□□□ -0.31
CDH1-201ENST00000261769 PIP5KL1Q5T9C9 394 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms