RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CCL27Q9Y4X3 112 aa17.23■□□□□ 0.35
TM6SF1-201ENST00000258909 ACANP16112 2415 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 A0A087WV62 115 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 COPEO14579 308 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 SEC22BO75396 215 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 RSL1D1O76021 490 aaKnown RBP17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 RCBTB2O95199 551 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 IL18BPO95998 194 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 ZNF708P17019 499 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 NTSP30990 170 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 RIPPLY3P57055 190 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 B3GALT5-AS1P59052 145 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 FBXW10Q5XX13 1052 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 KIF18BQ86Y91 864 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 UBQLNLQ8IYU4 475 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 WNT2BQ93097 391 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 ELP4Q96EB1 424 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 TM9SF2Q99805 663 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 RBM24Q9BX46 236 aaKnown RBP17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 TAS2R7Q9NYW3 318 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 MED11Q9P086 117 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 CLCF1Q9UBD9 225 aa17.22■□□□□ 0.35
TM6SF1-201ENST00000258909 FADS1O60427 444 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 TGM6O95932 706 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 UROSP10746 265 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 EPXP11678 715 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 KRT4P19013 534 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 PSPHP78330 225 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 MRPS22P82650 360 aaKnown RBP17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 KIAA0040Q15053 153 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 ZNF551Q7Z340 670 aaPredicted RBP17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 GRAMD2AQ8IUY3 354 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 C10orf107Q8IVU9 208 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 OR2L13Q8N349 312 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 OR2M3Q8NG83 312 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 OR5M1Q8NGP8 315 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 FAM76AQ8TAV0 307 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 SFXN3Q9BWM7 321 aa17.21■□□□□ 0.35
TM6SF1-201ENST00000258909 PSMG1O95456 288 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 CHMP24386 653 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 CPA2P48052 419 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 DSCR4P56555 118 aaPredicted RBP17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 NAA20P61599 178 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 HSPB3Q12988 150 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 DAZAP2Q15038 168 aaPredicted RBP17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 DECR1Q16698 335 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 CYP27C1Q4G0S4 372 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 MARCH3Q86UD3 253 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 TDRPQ86YL5 185 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 FADS6Q8N9I5 356 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 OR2T11Q8NH01 316 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 NINJ1Q92982 152 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 CIDECQ96AQ7 238 aaPredicted RBP17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 UCN2Q96RP3 112 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 EQTNQ9NQ60 294 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 GALNT8Q9NY28 637 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 MRPS18CQ9Y3D5 142 aaKnown RBP17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 VPS13CQ709C8 3753 aa17.2■□□□□ 0.34
TM6SF1-201ENST00000258909 GXYLT2A0PJZ3 443 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 H0YC42 278 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 H3BQF6 201 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 AKAP10O43572 662 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 GMFGO60234 142 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 HK1P19367 917 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 GABRA3P34903 492 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 TPD52P55327 224 aaPredicted RBP17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 POU4F3Q15319 338 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 RAET1LQ5VY80 246 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 LIPMQ5VYY2 423 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 IKBIPQ70UQ0 350 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 CNPY4Q8N129 248 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 DUSP19Q8WTR2 217 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 FOXC2Q99958 501 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 GATA5Q9BWX5 397 aaPredicted RBP17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 LRTM1Q9HBL6 345 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 Q9N2J8 555 aa17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 WBP11Q9Y2W2 641 aaKnown RBP17.19■□□□□ 0.34
TM6SF1-201ENST00000258909 AZIN1O14977 448 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 DIAPH2O60879 1101 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 SLITRK5O94991 958 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 IL33O95760 270 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 DNASE1P24855 282 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 SORDQ00796 357 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 ZNHIT3Q15649 155 aaPredicted RBP17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 ZNF385BQ569K4 471 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 Q6ZSR9 355 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 P4HA3Q7Z4N8 544 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 GALNT10Q86SR1 603 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 EXOC3L1Q86VI1 746 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 CLHC1Q8NHS4 586 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 PIK3R3Q92569 461 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 DTNBP1Q96EV8 351 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 ZFP3Q96NJ6 502 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 LMF2Q9BU23 707 aaKnown RBP17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 TUBB1Q9H4B7 451 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 C1orf109Q9NX04 203 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 BAIAP2L1Q9UHR4 511 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 ZNF337Q9Y3M9 751 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 TLDC2A0PJX2 215 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms