RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SLC22A18Q96BI1 424 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 CEP19Q96LK0 163 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 MCHR1Q99705 422 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 FGF20Q9NP95 211 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 TXNL4BQ9NX01 149 aaKnown RBP18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 SSR3Q9UNL2 185 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 ZNF443Q9Y2A4 671 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 YARS2Q9Y2Z4 477 aaKnown RBP18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 LOC105369274A0A096LPK9 316 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 LOC102723532A0A0G2JNH3 316 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 DUXAA6NLW8 204 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 PIP5K1CO60331 668 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 SNX4O95219 450 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 CH25HO95992 272 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 POLR2CP19387 275 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 CTHP32929 405 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 GPR4P46093 362 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 RORCP51449 518 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 WNT4P56705 351 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 RAB40BQ12829 278 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 KIR2DS3Q14952 304 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 SUZ12Q15022 739 aaKnown RBP18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 DUSP5Q16690 384 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 SLC30A6Q6NXT4 461 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 PLEKHM3Q6ZWE6 761 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 RRM2BQ7LG56 351 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 GDF7Q7Z4P5 450 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 OR4N4Q8N0Y3 316 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 OR4Q3Q8NH05 313 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 PIGXQ8TBF5 258 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 TMEM255BQ8WV15 326 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 SERINC2Q96SA4 455 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 NELL2Q99435 816 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 TPK1Q9H3S4 243 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 ANKRD19PQ9H560 264 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 C14orf119Q9NWQ9 140 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 KLHL28Q9NXS3 571 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 DAPP1Q9UN19 280 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 SPIN1Q9Y657 262 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 LOC110117498-PIK3R3F6TDL0 507 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 AP3D1O14617 1153 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 RGS5O15539 181 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 MYL12AP19105 171 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 PTNP21246 168 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 MTNR1AP48039 350 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 BNC1Q01954 994 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 ID2Q02363 134 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 MXD1Q05195 221 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 DECR1Q16698 335 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 MINDY4Q4G0A6 757 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 CCNJQ5T5M9 372 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 DESI1Q6ICB0 168 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 GDPD3Q7L5L3 318 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 NRMQ8IXM6 262 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 TMEFF1Q8IYR6 380 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 OR9Q1Q8NGQ5 310 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 OR10G6Q8NH81 332 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 GPR151Q8TDV0 419 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 ACOT11Q8WXI4 607 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 GATAD2BQ8WXI9 593 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 ASB15Q8WXK1 588 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 MRGPRX1Q96LB2 322 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 SLC38A2Q96QD8 506 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 TWSG1Q9GZX9 223 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 FBRSQ9HAH7 460 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 PHF11Q9UIL8 331 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 MRPS2Q9Y399 296 aaKnown RBP18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 WDR45Q9Y484 360 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 EYSQ5T1H1 3165 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 ZNF860A6NHJ4 632 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 KDM4EB2RXH2 506 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 TNFSF14O43557 240 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 ATP6V1G1O75348 118 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 CD79BP40259 229 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 DLX2Q07687 328 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 CARTPTQ16568 116 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 TRMT12Q53H54 448 aaKnown RBP18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 ZNF836Q6ZNA1 936 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 LAX1Q8IWV1 398 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 PIK3R3Q92569 461 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 SLC41A3Q96GZ6 507 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 RERGLQ9H628 205 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 MTHFD2LQ9H903 347 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 PILRAQ9UKJ1 303 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 SCML1Q9UN30 329 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 NCKAP1Q9Y2A7 1128 aa18.24■□□□□ 0.51
CDC42EP1-201ENST00000249014 GSAPA4D1B5 854 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 KLF4O43474 513 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 CDRT1O95170 752 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 FPR3P25089 353 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 GPR18Q14330 331 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 ARHGAP11BQ3KRB8 267 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 C22orf42Q6IC83 251 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 FIGLAQ6QHK4 219 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 PRSS41Q7RTY9 318 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 POGLUT1Q8NBL1 392 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 MRPL38Q96DV4 380 aaKnown RBP18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 S1PR5Q9H228 398 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 CLEC1BQ9P126 229 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 IL20RAQ9UHF4 553 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms