RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 HOXB13Q92826 284 aaPredicted RBP17.21■□□□□ 0.35
HOXC11-201ENST00000243082 PEX11GQ96HA9 241 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 IL4I1Q96RQ9 567 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 CLN6Q9NWW5 311 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 KCNE5Q9UJ90 142 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 TLCD2A6NGC4 264 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 GABARAPO95166 117 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 NSA2O95478 260 aaKnown RBP17.21■□□□□ 0.35
HOXC11-201ENST00000243082 MLLT3P42568 568 aaPredicted RBP17.21■□□□□ 0.35
HOXC11-201ENST00000243082 STT3AP46977 705 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 ZP2Q05996 745 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 ST3GAL4Q11206 333 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 PRICKLE2Q7Z3G6 844 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 VWA5B2Q8N398 1253 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 OR52R1Q8NGF1 315 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 GPR151Q8TDV0 419 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 MCHR1Q99705 422 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 RAB33BQ9H082 229 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 ANKRD19PQ9H560 264 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 EPHA6Q9UF33 1036 aa17.21■□□□□ 0.35
HOXC11-201ENST00000243082 PCDH15Q96QU1 1955 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 HYKKA2RU49 373 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 AP3D1O14617 1153 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 HRO43593 1189 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 OR10H2O60403 315 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 DCNP07585 359 aaKnown RBP17.2■□□□□ 0.34
HOXC11-201ENST00000243082 GABRA3P34903 492 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 CXCL12P48061 93 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 FNTBP49356 437 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 PPM1FP49593 454 aaPredicted RBP17.2■□□□□ 0.34
HOXC11-201ENST00000243082 ZNF136P52737 540 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 SKP1P63208 163 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 DMWDQ09019 674 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 SYT16Q17RD7 645 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 TRUB1Q8WWH5 349 aaKnown RBP17.2■□□□□ 0.34
HOXC11-201ENST00000243082 GAB3Q8WWW8 586 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 FCGR1BQ92637 280 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 SLC25A19Q9HC21 320 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 SOHLH2Q9NX45 425 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 CLDN16Q9Y5I7 305 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 RNF215Q9Y6U7 377 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 EML5Q05BV3 1969 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 GXYLT2A0PJZ3 443 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 RHPN2P1A8MT19 583 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 KIAA0513O60268 411 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 FOXD2O60548 495 aaPredicted RBP17.2■□□□□ 0.34
HOXC11-201ENST00000243082 CTNSO60931 367 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 ENTPD6O75354 484 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 NKX2-2O95096 273 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 ALDH4A1P30038 563 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 SLC15A1P46059 708 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 IGLV3-21P80748 117 aaPredicted RBP17.2■□□□□ 0.34
HOXC11-201ENST00000243082 BNIP3Q12983 259 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 SLC13A2Q13183 592 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 ERV3-1Q14264 604 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 IRF3Q14653 427 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 TMEM201Q5SNT2 666 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 GARNL3Q5VVW2 1013 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 NIPAL1Q6NVV3 410 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 PLEKHM3Q6ZWE6 761 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 MEX3DQ86XN8 651 aaKnown RBP17.2■□□□□ 0.34
HOXC11-201ENST00000243082 KIF18BQ86Y91 864 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 NKAIN4Q8IVV8 208 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 STX19Q8N4C7 294 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 IQCF1Q8N6M8 205 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 BCL7BQ9BQE9 202 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 CHRNA10Q9GZZ6 450 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 CACYBPQ9HB71 228 aaKnown RBP17.2■□□□□ 0.34
HOXC11-201ENST00000243082 PDE7BQ9NP56 450 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 LRIT1Q9P2V4 623 aa17.2■□□□□ 0.34
HOXC11-201ENST00000243082 PEX12O00623 359 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 CDC123O75794 336 aaPredicted RBP17.19■□□□□ 0.34
HOXC11-201ENST00000243082 BCL10O95999 233 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 AK1P00568 194 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 DBIP07108 87 aaKnown RBP17.19■□□□□ 0.34
HOXC11-201ENST00000243082 ADRA2AP08913 450 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 GSTM3P21266 225 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 TGFBR2P37173 567 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 GIPRP48546 466 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 EPHA4P54764 986 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 C21orf59P57076 290 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 POU6F2P78424 691 aaPredicted RBP17.19■□□□□ 0.34
HOXC11-201ENST00000243082 EIPR1Q53HC9 387 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 AP1ARQ63HQ0 302 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 FIGNL1Q6PIW4 674 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 CASP12Q6UXS9 341 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 ZNF730Q6ZMV8 503 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 GDF7Q7Z4P5 450 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 GALNT12Q8IXK2 581 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 ZNF595Q8IYB9 648 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 TBC1D15Q8TC07 691 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 GNPDA2Q8TDQ7 276 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 SLC41A3Q96GZ6 507 aa17.19■□□□□ 0.34
HOXC11-201ENST00000243082 SPRTNQ9H040 489 aaPredicted RBP17.19■□□□□ 0.34
HOXC11-201ENST00000243082 DUSP15Q9H1R2 295 aaPredicted RBP17.19■□□□□ 0.34
HOXC11-201ENST00000243082 CNOT2Q9NZN8 540 aaKnown RBP17.19■□□□□ 0.34
HOXC11-201ENST00000243082 TMEM184BQ9Y519 407 aaPredicted RBP17.19■□□□□ 0.34
HOXC11-201ENST00000243082 NPIPA5A0A0B4J1W7 369 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 FITM1A5D6W6 292 aa17.18■□□□□ 0.34
HOXC11-201ENST00000243082 EFCAB10A6NFE3 127 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms