RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ST13P50502 369 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 SESN3P58005 492 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 TAS2R41P59536 307 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 SYPL1Q16563 259 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 LIN52Q52LA3 116 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 ATP1A1-AS1Q5TC04 95 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 ZNF385CQ66K41 422 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 BORAQ6PGQ7 559 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 PLEKHM3Q6ZWE6 761 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 SPACA3Q8IXA5 215 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 FRG2CA6NGY1 282 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 H0Y3Z8 333 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 ASNA1O43681 348 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 DKK1O94907 266 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 RECKO95980 971 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 IFNW1P05000 195 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 CD247P20963 164 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 DRD5P21918 477 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 ZNF41P51814 821 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 POLE2P56282 527 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 FUT7Q11130 342 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 CLN3Q13286 438 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 CRB2Q5IJ48 1285 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 CPZQ66K79 652 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 C6orf89Q6UWU4 347 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 HMGN2P46Q86SG4 172 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 CDK20Q8IZL9 346 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 ANKFN1Q8N957 763 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 GOT1L1Q8NHS2 421 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 TP53INP1Q96A56 240 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 SGCZQ96LD1 299 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 TRNT1Q96Q11 434 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 PCDHAC1Q9H158 963 aa10.31□□□□□ -0.76
TNFAIP3-201ENST00000237289 EFSO43281 561 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 CBX7O95931 251 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 UMODP07911 640 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 F8A1P23610 371 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 MTX3Q5HYI7 312 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 COX20Q5RI15 118 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 DLEU7Q6UYE1 221 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 LRRC74BQ6ZQY2 392 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 NUBPLQ8TB37 319 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 FNDC11Q9BVV2 318 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 CADM1Q9BY67 442 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 CMTM6Q9NX76 183 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 KIF17Q9P2E2 1029 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 EXO1Q9UQ84 846 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 TFPIP10646 304 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 COX6A1P12074 109 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 RRM2P31350 389 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 IFI44LQ53G44 452 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 LACTB2Q53H82 288 aaPredicted RBP10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 FGD3Q5JSP0 725 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 PRAMEF20Q5VT98 475 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 IGF2-ASQ6U949 168 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 ZNF550Q7Z398 422 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 SLC35A4Q96G79 324 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 PCDHGA6Q9Y5G7 932 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 KIF26BQ2KJY2 2108 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 VCANP13611 3396 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 NPIPA5A0A0B4J1W7 369 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 GXYLT2A0PJZ3 443 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 NPIPA7E9PJI5 369 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 KLRC4-KLRK1H3BQV0 150 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 PGM3O95394 542 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 NPIPA8P0DM63 369 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 GPX2P18283 190 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 KDELR2P33947 212 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 DCTP40126 519 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 PEX19P40855 299 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 RNF144AP50876 292 aaPredicted RBP10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 IGLV3-21P80748 117 aaPredicted RBP10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 NUP54Q7Z3B4 507 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 EID3Q8N140 333 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 ATP6V1C2Q8NEY4 427 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 KAT8Q9H7Z6 458 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 MDC1Q14676 2089 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 HRKO00198 91 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 NME4O00746 187 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 ITGAMP11215 1152 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 HTR1EP28566 365 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 ATP12AP54707 1039 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 SLC37A1P57057 533 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 SMIM11AP58511 58 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 SNRPNP63162 240 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 DUSP2Q05923 314 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 PCOLCEQ15113 449 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 EBPQ15125 230 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 ZSWIM7Q19AV6 140 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 SLC15A4Q8N697 577 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 OR8K3Q8NH51 312 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 PHF12Q96QT6 1004 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 SERINC1Q9NRX5 453 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 SACM1LQ9NTJ5 587 aa10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 BOKQ9UMX3 212 aaPredicted RBP10.3□□□□□ -0.76
TNFAIP3-201ENST00000237289 IGKV3D-11A0A0A0MRZ8 115 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 NUDT7P0C024 238 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 CHRNEQ04844 493 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 MPEG1Q2M385 716 aa10.29□□□□□ -0.76
TNFAIP3-201ENST00000237289 RPS26P11Q5JNZ5 115 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms