RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 KCNK10P57789 538 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 HBA1P69905 142 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 PSG6Q00889 435 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 GUCY1A3Q02108 690 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.36□□□□□ -0.756e-7■■■□□ 15
SF3B6-201ENST00000233468 MFSD12Q6NUT3 480 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 PRR22Q8IZ63 422 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 SIMC1Q8NDZ2 872 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 OR2M7Q8NG81 312 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 ADAMTS15Q8TE58 950 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 JADE3Q92613 823 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 FRMD6Q96NE9 622 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 CCDC115Q96NT0 180 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 PANX1Q96RD7 426 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 STACQ99469 402 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 SLX1AQ9BQ83 275 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 G6PC3Q9BUM1 346 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 ACTRT3Q9BYD9 372 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 IL1RL2Q9HB29 575 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 SH2D2AQ9NP31 389 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 NPHS2Q9NP85 383 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 EQTNQ9NQ60 294 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 DUSP22Q9NRW4 184 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 KLRF1Q9NZS2 232 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 SEC14L3Q9UDX4 400 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 DCTN4Q9UJW0 460 aa10.36□□□□□ -0.75
SF3B6-201ENST00000233468 CHCHD2Q9Y6H1 151 aaPredicted RBP10.36□□□□□ -0.75
SF3B6-201ENST00000233468 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.36□□□□□ -0.75
SF3B6-201ENST00000233468 ANKUB1A6NFN9 424 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 WIPF3A6NGB9 483 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 RFXANKO14593 260 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 NKX2-2O95096 273 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 CBX6O95503 412 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 IL33O95760 270 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 AK1P00568 194 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 LDLRP01130 860 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 HMGN2P05204 90 aaKnown RBP10.35□□□□□ -0.75
SF3B6-201ENST00000233468 NCF2P19878 526 aaPredicted RBP10.35□□□□□ -0.75
SF3B6-201ENST00000233468 EFNA1P20827 205 aaPredicted RBP10.35□□□□□ -0.75
SF3B6-201ENST00000233468 ELAVL4P26378 380 aaKnown RBP10.35□□□□□ -0.75
SF3B6-201ENST00000233468 CHI3L1P36222 383 aaPredicted RBP10.35□□□□□ -0.75
SF3B6-201ENST00000233468 PIGAP37287 484 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 DCTP40126 519 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 CASP6P55212 293 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 WNT3P56703 355 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 GPR85P60893 370 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 PPIAP62937 165 aaKnown RBP10.35□□□□□ -0.75
SF3B6-201ENST00000233468 GAB1Q13480 694 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 SQLEQ14534 574 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 LASP1Q14847 261 aaKnown RBP10.35□□□□□ -0.75
SF3B6-201ENST00000233468 ZNF324BQ6AW86 544 aaPredicted RBP10.35□□□□□ -0.75
SF3B6-201ENST00000233468 CDC73Q6P1J9 531 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 NPSR1Q6W5P4 371 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 CPSF7Q8N684 471 aaKnown RBP10.35□□□□□ -0.75
SF3B6-201ENST00000233468 COX18Q8N8Q8 333 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 ITCHQ96J02 903 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 ZNF597Q96LX8 424 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 ADOQ96SZ5 270 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 EBF4Q9BQW3 602 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 ANGPTL4Q9BY76 406 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 CXorf36Q9H7Y0 433 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 ZFP64Q9NPA5 681 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 SDHAF3Q9NRP4 125 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 SIRT3Q9NTG7 399 aaPredicted RBP10.35□□□□□ -0.75
SF3B6-201ENST00000233468 CNOT11Q9UKZ1 510 aaKnown RBP10.35□□□□□ -0.75
SF3B6-201ENST00000233468 ABCG2Q9UNQ0 655 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 NTNG1Q9Y2I2 539 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 POLEQ07864 2286 aa10.35□□□□□ -0.75
SF3B6-201ENST00000233468 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 RNF103-CHMP3A0A140T963 221 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 PRAMEF25A6NGN4 478 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 NPIPA5E9PKD4 350 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 TSPAN2O60636 221 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 ANP32DO95626 131 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 KRT75O95678 551 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 HPGDP15428 266 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 ATP6V1C1P21283 382 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 GCKP35557 465 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 CASP3P42574 277 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 MAGEA8P43361 318 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 ARFIP2P53365 341 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 POU6F2P78424 691 aaPredicted RBP10.34□□□□□ -0.75
SF3B6-201ENST00000233468 PMP22Q01453 160 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 HYAL4Q2M3T9 481 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 ATAD3BQ5T9A4 648 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 PRAMEF20Q5VT98 475 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 GFRALQ6UXV0 394 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 C6orf120Q7Z4R8 191 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 ANKRD46Q86W74 232 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 CLECL1Q8IZS7 167 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 GHDCQ8N2G8 530 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 FAM109AQ8N4B1 249 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 GOT1L1Q8NHS2 421 aaPredicted RBP10.34□□□□□ -0.75
SF3B6-201ENST00000233468 HOXB13Q92826 284 aaPredicted RBP10.34□□□□□ -0.75
SF3B6-201ENST00000233468 HGDQ93099 445 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 GIMAP5Q96F15 307 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 TMEM41AQ96HV5 264 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 MARK4Q96L34 752 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 JSRP1Q96MG2 331 aaPredicted RBP10.34□□□□□ -0.75
SF3B6-201ENST00000233468 GPR137Q96N19 417 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms