RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 NKX2-2O95096 273 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 LDLRP01130 860 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 HMGN2P05204 90 aaKnown RBP11.59□□□□□ -0.55
LSM5-201ENST00000223084 ALOX5P09917 674 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 GDF1P27539 372 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 S100A3P33764 101 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 PTGS2P35354 604 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 CA7P43166 264 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 TRPC1P48995 793 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 IDH3AP50213 366 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 MRPS22P82650 360 aaKnown RBP11.59□□□□□ -0.55
LSM5-201ENST00000223084 TP53BP2Q13625 1128 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 EFR3AQ14156 821 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 SLC10A1Q14973 349 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 DECR1Q16698 335 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 SLC30A6Q6NXT4 461 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 C3P1Q6ZMU1 363 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 Q6ZPB1 254 aaPredicted RBP11.59□□□□□ -0.55
LSM5-201ENST00000223084 TRILQ7L0X0 811 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 OR8J2Q8NGG1 315 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 SSC4DQ8WTU2 575 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 JADE3Q92613 823 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 RELTQ969Z4 430 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 CHMP6Q96FZ7 201 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 TMEM41AQ96HV5 264 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 SLC6A15Q9H2J7 730 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 LDAHQ9H6V9 325 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 EXO5Q9H790 373 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 PLSCR2Q9NRY7 297 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 GPATCH2Q9NW75 528 aa11.59□□□□□ -0.55
LSM5-201ENST00000223084 SPTAN1Q13813 2472 aaKnown RBP11.59□□□□□ -0.55
LSM5-201ENST00000223084 TRGV5A0A0B4J1U4 118 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 A0A1B0GUH1 482 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 TTC36A6NLP5 189 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 E9PBE3 544 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 NPIPA2E9PIF3 369 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 NPIPA3F8WFD2 350 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 CCL21O00585 134 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 SNPHO15079 494 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 UBDO15205 165 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 SCO2O43819 266 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 TRAPPC6AO75865 159 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 UTS2O95399 124 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 IL33O95760 270 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 IGHG3P01860 377 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 TPOP07202 933 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 IDO1P14902 403 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 PTPN6P29350 595 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 PRIM2P49643 509 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 GAS1P54826 345 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 AQP5P55064 265 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 CASP9P55211 416 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 RPS26P62854 115 aaKnown RBP11.58□□□□□ -0.56
LSM5-201ENST00000223084 PSPHP78330 225 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 SNTA1Q13424 505 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 VPS26BQ4G0F5 336 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 PDCD4Q53EL6 469 aaKnown RBP11.58□□□□□ -0.56
LSM5-201ENST00000223084 EXOSC6Q5RKV6 272 aaKnown RBP11.58□□□□□ -0.56
LSM5-201ENST00000223084 CCNJQ5T5M9 372 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 TIGD3Q6B0B8 471 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 OR5M10Q6IEU7 315 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 ARHGAP11AQ6P4F7 1023 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 TMEM81Q6P7N7 255 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 FIGNL1Q6PIW4 674 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 PAOXQ6QHF9 649 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 NCCRP1Q6ZVX7 275 aaPredicted RBP11.58□□□□□ -0.56
LSM5-201ENST00000223084 ACAD11Q709F0 780 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 ZAR1Q86SH2 424 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 WDSUB1Q8N9V3 476 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 OR56A1Q8NGH5 318 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 OR1J4Q8NGS1 313 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 SFXN5Q8TD22 340 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 RNF138Q8WVD3 245 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 CDS1Q92903 461 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 MS4A3Q96HJ5 214 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 RTN4RQ9BZR6 473 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 UBQLN3Q9H347 655 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 NEUROD4Q9HD90 331 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 SERHLQ9NQF3 203 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 FBXO34Q9NWN3 711 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 B4GALT7Q9UBV7 327 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 C15orf41Q9Y2V0 281 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 KCNE3Q9Y6H6 103 aa11.58□□□□□ -0.56
LSM5-201ENST00000223084 RNF103-CHMP3A0A140T963 221 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 A0A1B0GVC2 190 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 PRSS51A0A1B0GVH4 220 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 B4DXG7 233 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 PRRG2O14669 202 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 ADAM10O14672 748 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 FADS1O60427 444 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 ZG16O60844 167 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 SLC22A3O75751 556 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 KCNK2O95069 426 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 KCNH1O95259 989 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 TGDSO95455 350 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 C1QCP02747 245 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 ENDOUP21128 410 aaKnown RBP11.57□□□□□ -0.56
LSM5-201ENST00000223084 EVI2BP34910 448 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 MAN2A2P49641 1150 aa11.57□□□□□ -0.56
LSM5-201ENST00000223084 CASP6P55212 293 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms