RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 SFRP5Q5T4F7 317 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 MEDAGQ5VYS4 303 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 CCSAPQ6IQ19 270 aaPredicted RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 METTL2BQ6P1Q9 378 aaKnown RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 HSDL2Q6YN16 418 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 FAM83HQ6ZRV2 1179 aaPredicted RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 GAREM2Q75VX8 874 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 DDX53Q86TM3 631 aaKnown RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 VRK2Q86Y07 508 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 LIX1LQ8IVB5 337 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 FAM26EQ8N5C1 309 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 TMEM99Q8N816 258 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 ZNF527Q8NB42 609 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 OR5AR1Q8NGP9 310 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 OR56A3Q8NH54 315 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 ECHDC3Q96DC8 303 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 CXorf58Q96LI9 332 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 C12orf66Q96MD2 445 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 GPR137Q96N19 417 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 LINC00052Q96N35 136 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 FCRL4Q96PJ5 515 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 TRAF4Q9BUZ4 470 aaPredicted RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 RBCK1Q9BYM8 510 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 NLNQ9BYT8 704 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 OR51I1Q9H343 314 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 NIPAL2Q9H841 368 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 SYNPO2LQ9H987 977 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 FKRPQ9H9S5 495 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 BRF2Q9HAW0 419 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 ENAMQ9NRM1 1142 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 SEMA4GQ9NTN9 838 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 KCNE2Q9Y6J6 123 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 CACNA1IQ9P0X4 2223 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 ATP6V1G2-DDX39BF2Z307 99 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 CHST10O43529 356 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 RFPL3O75679 317 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 EOMESO95936 686 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 GYPBP06028 91 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 ACP2P11117 423 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 HOXB6P17509 224 aaKnown RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 PPIBP23284 216 aaKnown RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 PTGS2P35354 604 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 ACVR1BP36896 505 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 ARHGDIBP52566 201 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 DCDC1P59894 354 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 PPP3R1P63098 170 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 CDK5Q00535 292 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 OC90Q02509 493 aaPredicted RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 TAP2Q03519 686 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 TPBGQ13641 420 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 SUZ12Q15022 739 aaKnown RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 SLC36A2Q495M3 483 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 ARSIQ5FYB1 569 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 GDPGP1Q6ZNW5 385 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 IDO2Q6ZQW0 420 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 C16orf62Q7Z3J2 963 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 CDH24Q86UP0 819 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 CBARPQ8N350 705 aaPredicted RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 AP2M1Q96CW1 435 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 ZNF354BQ96LW1 612 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 FNDC11Q9BVV2 318 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 POLDIP3Q9BY77 421 aaKnown RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 MED28Q9H204 178 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 OR2AG1Q9H205 316 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 TMEM245Q9H330 911 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 GHITMQ9H3K2 345 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 KLHL1Q9NR64 748 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 LIPT1Q9Y234 373 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 A0A1W2PQ45 241 aaPredicted RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 A0A1W2PQY0 241 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 A0A1W2PRU2 124 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 NEDD8-MDP1E9PL57 170 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 H3BSH0 61 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 FAAHO00519 579 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 SOCS5O75159 536 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 SLC43A1O75387 559 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 ZIC2O95409 532 aaPredicted RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 RAF1P04049 648 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 SYN1P17600 705 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 POLR2CP19387 275 aaPredicted RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 THBS2P35442 1172 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 AP2S1P53680 142 aaPredicted RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 CDH11P55287 796 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 SLC3A1Q07837 685 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 TMEM115Q12893 351 aaPredicted RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 GRM7Q14831 915 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 LASP1Q14847 261 aaKnown RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 AANATQ16613 207 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 NTRK2Q16620 822 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 OCLNQ16625 522 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 PLEKHS1Q5SXH7 462 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 LYPLAL1Q5VWZ2 237 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 Q6ZNB5 142 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 TRMT11Q7Z4G4 463 aaKnown RBP5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 TRIM69Q86WT6 500 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 TRAPPC5Q8IUR0 188 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 SIAH3Q8IW03 269 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 VN1R2Q8NFZ6 395 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 OR2A12Q8NGT7 310 aa5.47□□□□□ -1.53
CEACAM1-201ENST00000161559 TMEM255BQ8WV15 326 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms