RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 RAB2AP61019 212 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 MAT1AQ00266 395 aaKnown RBP9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 RAB39AQ14964 217 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 OCLNQ16625 522 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 TNFAIP8L3Q5GJ75 292 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 YOD1Q5VVQ6 348 aaPredicted RBP9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 SLCO4C1Q6ZQN7 724 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 NINJ1Q92982 152 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 NXPE2Q96DL1 559 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 WASH6PQ9NQA3 447 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 EMC3Q9P0I2 261 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 KIAA1551Q9HCM1 1747 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 RETP07949 1114 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 PAX7P23759 505 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 PGFP49763 221 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 SELENOWP63302 87 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 ZP2Q05996 745 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 CBLBQ13191 982 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 KCNAB2Q13303 367 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 CEACAM7Q14002 265 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 GTDC1Q4AE62 458 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 TMEM196Q5HYL7 178 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 LEG1Q6P5S2 330 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 LILRA6Q6PI73 481 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 IL20RBQ6UXL0 311 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 OR52E2Q8NGJ4 325 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 FAM46AQ96IP4 442 aaKnown RBP9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 PCED1AQ9H1Q7 454 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 TMEM185BQ9H7F4 350 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 TMEM30AQ9NV96 361 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 CXorf51AA0A1B0GTR3 108 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 A6NLC8 198 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 HSPA12AO43301 675 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 RASAL1O95294 804 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 TGFBR3Q03167 851 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 MAD2L1BPQ15013 274 aaPredicted RBP9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 ZNF829Q3KNS6 432 aaPredicted RBP9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 ARSJQ5FYB0 599 aaPredicted RBP9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 SERPINA11Q86U17 422 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 ESX1Q8N693 406 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 ACOT12Q8WYK0 555 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 RIMS3Q9UJD0 308 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 DHDHQ9UQ10 334 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 H0YJX3 145 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 ARNTLO00327 626 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 GLP1RP43220 463 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 MAGEA3P43357 314 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 MAGEA8P43361 318 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 MADCAM1Q13477 382 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 SEC23BQ15437 767 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 CARTPTQ16568 116 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 SLC5A12Q1EHB4 618 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 ALG10Q5BKT4 473 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 SLC18B1Q6NT16 456 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 LRFN4Q6PJG9 635 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 ARMC10Q8N2F6 343 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 TMEM41AQ96HV5 264 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 SECISBP2Q96T21 854 aaKnown RBP9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 ELF4Q99607 663 aaPredicted RBP9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 PDFQ9HBH1 243 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 ATP13A2Q9NQ11 1180 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 SLC7A7Q9UM01 511 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 A0A1B0GX78 115 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 TMEM202A6NGA9 273 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 SHISA7A6NL88 538 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 H3BUI4 141 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 ZNF432O94892 652 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 CRABP1P29762 137 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 TSFMP43897 325 aaKnown RBP9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 ARPC4P59998 168 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 MELKQ14680 651 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 VTCN1Q7Z7D3 282 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 OR5D16Q8NGK9 328 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 TTTY10Q9BZA0 68 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 TAS2R10Q9NYW0 307 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 FBXO9Q9UK97 447 aaPredicted RBP9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 CLDN25C9JDP6 229 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 H0Y8X5 98 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 MBTPS2O43462 519 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 B4GALT3O60512 393 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 GRK5P34947 590 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 RAB15P59190 212 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 PSPHP78330 225 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 SFT2D3Q587I9 215 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 SPRYD4Q8WW59 207 aaPredicted RBP9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 FBXL20Q96IG2 436 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 IER2Q9BTL4 223 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 RBM24Q9BX46 236 aaKnown RBP9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 ARRDC1-AS1Q9H2J1 176 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 TUBA8Q9NY65 449 aaPredicted RBP9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 DHCR7Q9UBM7 475 aaKnown RBP9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 MEMO1Q9Y316 297 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 SPEF1Q9Y4P9 236 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 PCDHGB6Q9Y5F9 930 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 H3BSH0 61 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 FLRT2O43155 660 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 CNR2P34972 360 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 STARP49675 285 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 SCRN3Q0VDG4 424 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms