RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Vmn1r38Q8R2E1 302 aa21.43■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Vmn1r85Q8VIB8 308 aa21.43■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Pcdhgb2Q91XX7 928 aa21.43■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Sh3bp4Q921I6 962 aa21.43■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Clec2gQ9D676 269 aa21.43■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Tmeff2Q9QYM9 374 aa21.43■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Vmn2r18E9Q280 788 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Gm8897L7N294 181 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Rplp0P14869 317 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Ipcef1Q5DU31 406 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Q810M1 233 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Eif4e2Q8BMB3 245 aaKnown RBP21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Mrpl22Q8BU88 206 aaKnown RBP21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Ston1Q8CDJ8 730 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Irak2Q8CFA1 622 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Fmo2Q8K2I3 535 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Gabarapl1Q8R3R8 117 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Rnf8Q8VC56 488 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Olfr514Q8VFZ6 310 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Tada1Q99LM9 335 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Hspa12bQ9CZJ2 685 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Q9CZV2 255 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Trmt5Q9D0C4 501 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 EqtnQ9D9V2 337 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Natd1Q9DBW3 110 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Bmp10Q9R229 421 aa21.42■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Ptrhd1D3Z4S3 140 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Gm42957D6RFQ2 366 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Mpig6bD7PDD4 242 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Il20rbE9Q9A6 308 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Rnf148G3X9R7 316 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Adh1P00329 375 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Acvr2aP27038 513 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Klrb1aP27811 227 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Ido1P28776 407 aaKnown RBP21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Lrrk1Q3UHC2 2014 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Ankrd37Q569N2 159 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 PmlQ60953 885 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Trim46Q7TNM2 759 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Olfr1307Q7TQX1 312 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Vmn2r81Q80Z09 865 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 9130023H24RikQ8BG98 337 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Ckap4Q8BMK4 575 aaKnown RBP21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Snx16Q8C080 344 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Fam110cQ8VE94 421 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Tmem63aQ91YT8 804 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Slc25a36Q922G0 311 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Far1Q922J9 515 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 MrgprhQ99MT8 321 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 2610042L04RikQ9D073 150 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Nos1apQ9D3A8 503 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Tmem30cQ9D4D7 342 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 AgmatA2AS89 358 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Sult2a6B2RVI8 285 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Kctd17E0CYQ0 296 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Csnk2a2O54833 350 aaKnown RBP21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 B3galt2O54905 422 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Fgf17P63075 216 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Cct3P80318 545 aaKnown RBP21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 FhP97807 507 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 TfptQ3U1J1 259 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Pcgf5Q3UK78 256 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Clca4bQ3UW98 925 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Cnpy1Q4VAB4 94 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 4930512M02RikQ5SQK8 218 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Nr1h4Q60641 488 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Tusc1Q673H1 205 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Otub1Q7TQI3 271 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Olfr1133Q7TR44 313 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Olfr814Q7TRH4 310 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 BpifcQ8C186 509 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Esrp2Q8K0G8 717 aaKnown RBP21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Clec14aQ8VCP9 459 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Prss52Q9D9M0 321 aa21.41■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Smurf2A2A5Z6 748 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Pramef20B1ARV6 477 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Ccnb1ip1D3Z3K2 276 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Olfr1121L7MTT1 314 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 StarP51557 284 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Prss38Q3UKY7 322 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Ddx5Q61656 614 aaKnown RBP21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 ZpbpQ62522 350 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 TufmQ8BFR5 452 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Prox2Q8BII1 593 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Timmdc1Q8BUY5 285 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 BC024139Q8BVJ3 772 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Slc49a3Q8CE47 516 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Ubqln1Q8R317 582 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Spns3Q9D232 514 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Pbld1Q9DCG6 288 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 MioxQ9QXN5 285 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Olfr1006A2ALD2 312 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Zfp282E9PVC2 666 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Tcn2O88968 430 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Tm9sf2P58021 662 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Itgb8Q0VBD0 767 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Nell1Q2VWQ2 810 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Ccbe1Q3MI99 408 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Olfr527Q7TRT9 305 aa21.4■■□□□ 1.02
Upf3a-201ENSMUST00000043767 Syngr3Q8R191 229 aa21.4■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms