RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Erp27Q9D8U3 272 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Rasal1Q9Z268 799 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 4930433I11RikA0A0U1RPT6 723 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Pcdhgb8A0A140LI48 931 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm33543A0A1B0GSI5 81 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfr1034A0A1L1ST14 310 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Sac3d1A6H687 427 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfr605E9Q838 314 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfr1513L7N457 313 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Nmur1O55040 428 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Mrps6P58064 125 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Rras2P62071 204 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Pgap2Q3TQR0 254 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Dvl2Q60838 736 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ppp3r1Q63810 170 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Hs3st2Q673U1 367 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Zfp866Q6PGD2 520 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Tas2r110Q7M712 333 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ap4e1Q80V94 1122 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gpr176Q80WT4 515 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Slc26a11Q80ZD3 593 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Cd99l2Q8BIF0 237 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Crispld1Q8CGD2 500 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Uhrf1Q8VDF2 782 aaKnown RBP12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Taldo1Q93092 337 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Pex13Q9D0K1 405 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Cdrt4Q9DA64 179 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Insm2Q9JMC2 493 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Srebf1Q9WTN3 1134 aa12.67□□□□□ -0.38
Nup88-201ENSMUST00000035283 Zfp433A0A0J9YUD4 600 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm32687A0A1W2P6H7 600 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Fnd3c2A2AP83 941 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Xlr5aA2BI45 236 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm609E9Q573 300 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Rdh5O55240 318 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 TyrP11344 533 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Pou2f3P31362 431 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 TtkP35761 856 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Rln1P47932 185 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Cct3P80318 545 aaKnown RBP12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 NrtnP97463 195 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Fezf1Q0VDQ9 475 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 E330014E10RikQ3UL33 481 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 D5Ertd577eQ499F0 481 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Pxylp1Q8BHA9 480 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gpr152Q8BXS7 511 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Fam46bQ8C152 427 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 ZxdcQ8C8V1 858 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Cd209dQ91ZW8 237 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Tssk6Q925K9 273 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Tnk1Q99ML2 666 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Med27Q9DB40 311 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Syt11Q9R0N3 430 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 PrkraQ9WTX2 313 aaKnown RBP12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ms4a4aA0A087WRT7 236 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm4779A0A1B0GR91 561 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Kctd17E0CYQ0 296 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfr653E9PVA0 317 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Pcdh1F7BJK1 1077 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Vmn2r13L7N1X2 831 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Pdlim3O70209 316 aaKnown RBP12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 TertO70372 1122 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Tgfb1P04202 390 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 FpgsP48760 587 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Ucp2P70406 309 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Anxa4P97429 319 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Apoc2Q05020 97 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Nr2f1Q60632 422 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Tas2r104Q7M723 302 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfr384Q7TRX8 312 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Them6Q80ZW2 207 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfml2aQ8BHP7 681 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Adipor2Q8BQS5 386 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Slc22a29Q8BWG6 551 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 PpcdcQ8BZB2 204 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Lancl3Q8CD19 420 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 PiguQ8K358 434 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Vmn1r206Q8R277 312 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Osgin1Q8VC10 478 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfr692Q8VF03 329 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Hemk1Q921L7 340 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Sntg1Q925E1 517 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Klhl22Q99JN2 634 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Cstf1Q99LC2 431 aaKnown RBP12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Lamtor1Q9CQ22 161 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 4933421I07RikQ9D420 214 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Tmem43Q9DBS1 400 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Olfr938Q9EQ93 315 aa12.66□□□□□ -0.38
Nup88-201ENSMUST00000035283 Spag17Q5S003 2320 aa12.65□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm7929A0A286YDV3 213 aa12.65□□□□□ -0.38
Nup88-201ENSMUST00000035283 Enthd1E9Q1Z2 618 aa12.65□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm21977F6U3N7 213 aa12.65□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm8247F6VRJ8 213 aa12.65□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm8005F6YKY3 213 aa12.65□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm3015F6ZAP6 213 aa12.65□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm8212F6ZMY5 213 aa12.65□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm7954F7BAX1 213 aa12.65□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm8138F7BY56 213 aa12.65□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm8232F7CFJ3 213 aa12.65□□□□□ -0.38
Nup88-201ENSMUST00000035283 Gm17079F7D8Y4 213 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms