RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 HadhbQ99JY0 475 aaKnown RBP12.09□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Pdzk1ip1Q9CQH0 114 aa12.09□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Arv1Q9D0U9 266 aa12.09□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Wdr54Q9R0D8 334 aa12.09□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Xlr4aA2BI40 215 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Zfp607bG3X9H3 648 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Olfr209L7N1X3 305 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Tas2r7P59530 312 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Fabp5Q05816 135 aaKnown RBP12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Xlr4cQ3TKR2 215 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Mier2Q3U3N0 541 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Hectd3Q3U487 861 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Fam71f1Q3UZD7 341 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Rhbdd3Q8BP97 385 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Fam69cQ8BQT2 410 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Peli2Q8BST6 419 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Kiaa0513Q8R0A7 407 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Adgrg3Q8R0T6 542 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Olfr692Q8VF03 329 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Moxd1Q9CXI3 613 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Snx20Q9D2Y5 313 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Xlr4bQ9JJQ7 215 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 Lmx1aQ9JKU8 382 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 NsdhlQ9R1J0 362 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 AireQ9Z0E3 552 aa12.08□□□□□ -0.47
Clcn3-201ENSMUST00000004430 9630041A04RikD3Z3U4 205 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Vmn1r176G3UW31 304 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Klrg1O88713 188 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cd14P10810 366 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cdk1P11440 297 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Il1r2P27931 410 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Aldh3a2P47740 484 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ntsr2P70310 416 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Fbxw18Q3TSA9 469 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Sez6l2Q4V9Z5 910 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Meig1Q61845 88 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Pon2Q62086 354 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 PdgfrlQ6PE55 375 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Arhgef4Q7TNR9 484 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Prr5Q812A5 387 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Trim23Q8BGX0 574 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ppp1r3eQ8BRJ4 279 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cd276Q8VE98 316 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ces2cQ91WG0 561 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ash2lQ91X20 623 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cts3Q91ZD5 332 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 MrgprhQ99MT8 321 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Otub2Q9CQX0 234 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Dnmt3lQ9CWR8 421 aaKnown RBP12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Taf8Q9EQH4 308 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 FancgQ9EQR6 623 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Psmg2Q9EST4 264 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Mgl2A9XX86 381 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gm20547B8JJN0 1276 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gm11397F6V5V4 377 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gm5849J3QPE5 117 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Sypl1O09117 261 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 CfbP04186 761 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Dsc1P55849 886 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Il10rbQ61190 349 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Zfp180Q6NZI9 655 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Slc43a1Q8BSM7 564 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Lypd4Q8BVP6 246 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Bpifb2Q8C1E1 462 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr1263Q8VG63 306 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr447Q8VGP6 310 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hemk1Q921L7 340 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 RragcQ99K70 398 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Tcf19Q99KJ5 263 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Fam3bQ9D309 235 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 EqtnQ9D9V2 337 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cir1Q9DA19 450 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Mkrn2Q9ERV1 416 aaKnown RBP12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cyp2d22Q9JKY7 500 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Psma6Q9QUM9 246 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Naa10Q9QY36 235 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Mocs2Q9Z223 189 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ccdc149F6V035 524 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Bhlhe40O35185 411 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 F2rl3O88634 396 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cd63P41731 238 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Defa14P50712 85 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cdh11P55288 796 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Itgb8Q0VBD0 767 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 ptchd1Q14B62 888 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 TefmQ5SSK3 364 aaKnown RBP12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 CrhbpQ60571 322 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Pan3Q640Q5 837 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 BpiQ67E05 483 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Carns1Q6ZPS2 827 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Elp6Q8BK75 266 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Mab21l2Q8BPP1 359 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Leng9Q8BTN6 485 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Rbm12Q8R4X3 992 aaKnown RBP12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Tmem5Q8VDX6 444 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ccdc71Q8VEG0 433 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr1093Q8VF14 322 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Tram2Q924Z5 370 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Dhrs1Q99L04 313 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Tpra1Q99MU1 369 aa12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms