RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 ZNF619Q8N2I2 560 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 OR4C6Q8NH72 309 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 PIK3R3Q92569 461 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 PMM1Q92871 262 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 MYCBPQ99417 103 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-208ENST00000641023 SERTAD3Q9UJW9 196 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 CDC14AQ9UNH5 594 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 TMEM184BQ9Y519 407 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-208ENST00000641023 PCDHGA6Q9Y5G7 932 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 SPTBP11277 2137 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 TOX3O15405 576 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-208ENST00000641023 YKT6O15498 198 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 MSL3P1P0C860 447 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 GABRA3P34903 492 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 BTG2P78543 158 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 ZNF155Q12901 538 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-208ENST00000641023 MAD2L1BPQ15013 274 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-208ENST00000641023 NR0B2Q15466 257 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 GPR68Q15743 365 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 CNPY1Q3B7I2 92 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 CCNJQ5T5M9 372 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 LAIR2Q6ISS4 152 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 KCTD8Q6ZWB6 473 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 MAML2Q8IZL2 1156 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-208ENST00000641023 ZNF578Q96N58 590 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-208ENST00000641023 NDC1Q9BTX1 674 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 SCN3BQ9NY72 215 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 NDOR1Q9UHB4 597 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 ZNF443Q9Y2A4 671 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-208ENST00000641023 TPRKBQ9Y3C4 175 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 MAU2Q9Y6X3 613 aa16.1■□□□□ 0.17
PHGDH-208ENST00000641023 AGAP5A6NIR3 686 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 TGFBR3LH3BV60 316 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 ABCB7O75027 752 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 NKX2-2O95096 273 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 THBS1P07996 1170 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 S1PR1P21453 382 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 GGT2P36268 569 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 STT3AP46977 705 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 POU6F2P78424 691 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-208ENST00000641023 SERTAD2Q14140 314 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 SEC23BQ15437 767 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 EIPR1Q53HC9 387 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 KANSL1Q7Z3B3 1105 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 GPR141Q7Z602 305 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 PELOQ9BRX2 385 aaKnown RBP16.09■□□□□ 0.17
PHGDH-208ENST00000641023 SAP130Q9H0E3 1048 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 RBM38Q9H0Z9 239 aaKnown RBP16.09■□□□□ 0.17
PHGDH-208ENST00000641023 GMEB2Q9UKD1 530 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 CHST2Q9Y4C5 530 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 MUC3AQ02505 3323 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 SH3PXD2BA1X283 911 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 AP3D1O14617 1153 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 TPST2O60704 377 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 CFIP05156 583 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 DBIP07108 87 aaKnown RBP16.09■□□□□ 0.17
PHGDH-208ENST00000641023 CCNYL3P0C7X3 344 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 FOLR1P15328 257 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 MAOAP21397 527 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 TTKP33981 857 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 UGT2B15P54855 530 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 RGS8P57771 180 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-208ENST00000641023 TAS2R41P59536 307 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 NPTX1Q15818 432 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 TMEM71Q6P5X7 295 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 KLHL17Q6TDP4 642 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 DEPDC4Q8N2C3 294 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 OR1L3Q8NH93 324 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 HOXB13Q92826 284 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-208ENST00000641023 TMIGD2Q96BF3 282 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 NUDT22Q9BRQ3 303 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 FUZQ9BT04 418 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 YIPF2Q9BWQ6 316 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 POLR1BQ9H9Y6 1135 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 FANCEQ9HB96 536 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 POLE3Q9NRF9 147 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 RASSF1Q9NS23 344 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 CLDN16Q9Y5I7 305 aa16.09■□□□□ 0.17
PHGDH-208ENST00000641023 ARID1BQ8NFD5 2236 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-208ENST00000641023 CPED1A4D0V7 1026 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 PTGES3LE9PB15 166 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 IFNA16P05015 189 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 CSNK2BP67870 215 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 ST3GAL3Q11203 375 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 ZBED5Q49AG3 693 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 Q6ZPB1 254 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-208ENST00000641023 B3GNT8Q7Z7M8 397 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 CCDC71Q8IV32 467 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-208ENST00000641023 P3H2Q8IVL5 708 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 ENTHD1Q8IYW4 607 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 CLIP4Q8N3C7 705 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 FAM81AQ8TBF8 368 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 SLC38A4Q969I6 547 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 ZC3H10Q96K80 434 aaKnown RBP16.08■□□□□ 0.16
PHGDH-208ENST00000641023 OR1F2PQ96R84 312 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 TSC22D3Q99576 134 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 LMF2Q9BU23 707 aaKnown RBP16.08■□□□□ 0.16
PHGDH-208ENST00000641023 UCK2Q9BZX2 261 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 ZNF768Q9H5H4 540 aaKnown RBP16.08■□□□□ 0.16
PHGDH-208ENST00000641023 GAREM1Q9H706 876 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms