RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	C3AR1	Q16581	482 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	ANXA8L1	Q5VT79	327 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	TMEM211	Q6ICI0	200 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	XKRX	Q6PP77	449 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	NPSR1	Q6W5P4	371 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	DOLPP1	Q86YN1	238 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	OR8J2	Q8NGG1	315 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	OR1J4	Q8NGS1	313 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	PIWIL2	Q8TC59	973 aa	Known RBP	13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	TESC	Q96BS2	214 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	JSRP1	Q96MG2	331 aa	Predicted RBP	13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	OSBPL11	Q9BXB4	747 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	DPY30	Q9C005	99 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	TP63	Q9H3D4	680 aa	Predicted RBP	13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	SDHAF3	Q9NRP4	125 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	KLRF1	Q9NZS2	232 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	PCDHGB4	Q9UN71	923 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	ABCG2	Q9UNQ0	655 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	FLNB	O75369	2602 aa	Known RBP	13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	LRRC3C	A6NJW4	275 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	PDE9A	O76083	593 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	NKX2-2	O95096	273 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	IL33	O95760	270 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	HPN	P05981	417 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	TPO	P07202	933 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	GCK	P35557	465 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	MAP3K8	P41279	467 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	DIO3	P55073	304 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	LRRC74A	Q0VAA2	488 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	WDR75	Q8IWA0	830 aa	Known RBP	13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	KRTCAP2	Q8N6L1	136 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	OR56A1	Q8NGH5	318 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	SFXN5	Q8TD22	340 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	LRRC8C	Q8TDW0	803 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	RNF138	Q8WVD3	245 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	PPP1R36	Q96LQ0	422 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	C7orf26	Q96N11	449 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	NODAL	Q96S42	347 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	UBQLN3	Q9H347	655 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	EXO5	Q9H790	373 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	C15orf41	Q9Y2V0	281 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	MEMO1	Q9Y316	297 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	RELN	P78509	3460 aa		13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	USP9X	Q93008	2570 aa	Predicted RBP	13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	ASH1L	Q9NR48	2969 aa	Known RBP	13.05	□□□□□ -0.32
SDHD-209	ENST00000640554	PRSS51	A0A1B0GVH4	220 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	FIGNL2	A6NMB9	653 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	RNASET2	O00584	256 aa	Known RBP	13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	SDHD	O14521	159 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	SNPH	O15079	494 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	TGDS	O95455	350 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	ALOX5	P09917	674 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	RFPL3S	P0C7P2	107 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	GDF1	P27539	372 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	GABRA3	P34903	492 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	PTGER4	P35408	488 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	KIR3DL1	P43629	444 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	CCT3	P49368	545 aa	Known RBP	13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	CDK9	P50750	372 aa	Known RBP	13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	PRKAG1	P54619	331 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	HSF1	Q00613	529 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	PGS1	Q32NB8	556 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	WLS	Q5T9L3	541 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	MFSD12	Q6NUT3	480 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	ANGPTL8	Q6UXH0	198 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	FGD2	Q7Z6J4	655 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	PLCZ1	Q86YW0	608 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	ZNF808	Q8N4W9	903 aa	Predicted RBP	13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	NEIL3	Q8TAT5	605 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	GPR151	Q8TDV0	419 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	ACTRT2	Q8TDY3	377 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	DYDC1	Q8WWB3	177 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	FAM120B	Q96EK7	910 aa	Known RBP	13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	STAC	Q99469	402 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	DUSP22	Q9NRW4	184 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	FAM120C	Q9NX05	1096 aa	Known RBP	13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	TINAG	Q9UJW2	476 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	ACAD8	Q9UKU7	415 aa		13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	FAF1	Q9UNN5	650 aa	Predicted RBP	13.04	□□□□□ -0.32
SDHD-209	ENST00000640554	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	FAM47E-STBD1	D6RA91	191 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	NPIPA2	E9PIF3	369 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	NPIPA3	F8WFD2	350 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	CFLAR	O15519	480 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	WDR1	O75083	606 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	TRAPPC6A	O75865	159 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	GABRA1	P14867	456 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	IDO1	P14902	403 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	PTGDS	P41222	190 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	PPP2R2A	P63151	447 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	ART3	Q13508	389 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	TP53BP2	Q13625	1128 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	SPDYE7P	Q495Y7	208 aa		13.03	□□□□□ -0.32
SDHD-209	ENST00000640554	GXYLT1	Q4G148	440 aa		13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms