RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 MGME1Q9BQP7 344 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 IL25Q9H293 177 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 LRCH1Q9Y2L9 728 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 TIMM22Q9Y584 194 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 TRGV5A0A0B4J1U4 118 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 H6PDO95479 791 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 CSF2P04141 144 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 CHRM5P08912 532 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-218ENST00000640036 ZNF888P0CJ79 500 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-218ENST00000640036 HNRNPLP14866 589 aaKnown RBP eCLIP4.75□□□□□ -1.652e-7■■■□□ 17.7
SCN1A-218ENST00000640036 BPIP17213 487 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 IL4RP24394 825 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 CSNK1DP48730 415 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 CDH11P55287 796 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 DSTNP60981 165 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 FAPQ12884 760 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 WSCD2Q2TBF2 565 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 FIGNL1Q6PIW4 674 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 TMEM184AQ6ZMB5 413 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 DHFR2Q86XF0 187 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 NIPA2Q8N8Q9 360 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 WDR24Q96S15 920 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 FUCA2Q9BTY2 467 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 DNTTIP1Q9H147 329 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 ZFP57Q9NU63 452 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 SARDHQ9UL12 918 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 SSR3Q9UNL2 185 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 FEZF1A0PJY2 475 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 PLOD3O60568 738 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 BEST1O76090 585 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 PRH1P02810 166 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 FAM58BPP0C7Q3 252 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 CSNK1A1P48729 337 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 GPR18Q14330 331 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 PCK2Q16822 640 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 SPIN3Q5JUX0 258 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 OR4C11Q6IEV9 310 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 SPNS3Q6ZMD2 512 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 OR4D9Q8NGE8 314 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 TRIB3Q96RU7 358 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 MICU1Q9BPX6 476 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 CENPOQ9BU64 300 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 SDCBP2Q9H190 292 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 TSPAN10Q9H1Z9 355 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-218ENST00000640036 PTPN13Q12923 2485 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 OTOFQ9HC10 1997 aa4.75□□□□□ -1.65
SCN1A-218ENST00000640036 TDRD15B5MCY1 1934 aaKnown RBP4.74□□□□□ -1.65
SCN1A-218ENST00000640036 CACNA1DQ01668 2161 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 SLC43A1O75387 559 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 VNN2O95498 520 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 LIPCP11150 499 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 SDC2P34741 201 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 STARD6P59095 220 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 TUBA1BP68363 451 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 ST3GAL3Q11203 375 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 PMS2CLQ68D20 193 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 TUBA1AQ71U36 451 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 DND1Q8IYX4 353 aaKnown RBP4.74□□□□□ -1.65
SCN1A-218ENST00000640036 ZNF276Q8N554 614 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 POGLUT1Q8NBL1 392 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 OR14K1Q8NGZ2 314 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 DNAJB8Q8NHS0 232 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 CIDECQ96AQ7 238 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-218ENST00000640036 FBXL8Q96CD0 374 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 WDR83Q9BRX9 315 aaKnown RBP4.74□□□□□ -1.65
SCN1A-218ENST00000640036 SLC35A5Q9BS91 424 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 UCK2Q9BZX2 261 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 TMEM185BQ9H7F4 350 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 STARD5Q9NSY2 213 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 FAM118AQ9NWS6 357 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 C2orf42Q9NWW7 574 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 SLC35F4A4IF30 521 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 OR51F1A6NGY5 319 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 M0QZ24 198 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 SMAD6O43541 496 aaKnown RBP4.74□□□□□ -1.65
SCN1A-218ENST00000640036 INMTO95050 263 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 THRBP10828 461 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 BGNP21810 368 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 IL3RAP26951 378 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 MAPK3P27361 379 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-218ENST00000640036 OCLNQ16625 522 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 UBAP2Q5T6F2 1119 aaKnown RBP4.74□□□□□ -1.65
SCN1A-218ENST00000640036 B3GNTL1Q67FW5 361 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-218ENST00000640036 C3orf33Q6P1S2 294 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 ZYG11AQ6WRX3 759 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 TSPAN33Q86UF1 283 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 GALNT4Q8N4A0 578 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 OR2I1PQ8NGU4 316 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 RAB8BQ92930 207 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 OR51B6Q9H340 312 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 A0A1B0GTQ1 180 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 HDAC3O15379 428 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 HMGN1P05114 100 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 FPR1P21462 350 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 GPR19Q15760 415 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 NDUFAF7Q7L592 441 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 PIWIL3Q7Z3Z3 882 aaKnown RBP4.74□□□□□ -1.65
SCN1A-218ENST00000640036 CBARPQ8N350 705 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-218ENST00000640036 ZNF565Q8N9K5 539 aa4.74□□□□□ -1.65
SCN1A-218ENST00000640036 TCP10LQ8TDR4 215 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms