RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 SIRT5Q9NXA8 310 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 CLCF1Q9UBD9 225 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 STK38LQ9Y2H1 464 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 TIMM22Q9Y584 194 aa16.75■□□□□ 0.27
CLN6-220ENST00000637450 B4DXG7 233 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 PLOD2O00469 737 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 CHMP24386 653 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 IL12BP29460 328 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 MPIP34949 423 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 KRT20P35900 424 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 GSTM5P46439 218 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 CLDN18P56856 261 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 BTKQ06187 659 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 FBXW10Q5XX13 1052 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 SCIMPQ6UWF3 145 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 TRMT10CQ7L0Y3 403 aaKnown RBP16.74■□□□□ 0.27
CLN6-220ENST00000637450 LUZP2Q86TE4 346 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 SLC44A2Q8IWA5 706 aaPredicted RBP16.74■□□□□ 0.27
CLN6-220ENST00000637450 OR4N2Q8NGD1 307 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 DACH2Q96NX9 599 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 KCNA7Q96RP8 456 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 SHCBP1LQ9BZQ2 653 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 STMN4Q9H169 189 aaPredicted RBP16.74■□□□□ 0.27
CLN6-220ENST00000637450 ACBD3Q9H3P7 528 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 TAS2R9Q9NYW1 312 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 NFU1Q9UMS0 254 aa16.74■□□□□ 0.27
CLN6-220ENST00000637450 DOCK7Q96N67 2140 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 CCDC151A5D8V7 595 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 MYO1GB0I1T2 1018 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 ATE1O95260 518 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 RAF1P04049 648 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 ANXA4P09525 319 aaPredicted RBP16.73■□□□□ 0.27
CLN6-220ENST00000637450 ZNF708P17019 499 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 DDCP20711 480 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 GRK2P25098 689 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 DPP4P27487 766 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 EEF1A1P68104 462 aaKnown RBP16.73■□□□□ 0.27
CLN6-220ENST00000637450 GAB1Q13480 694 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 BCL2A1Q16548 175 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 EEF1A1P5Q5VTE0 462 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 FAM9CQ8IZT9 166 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 ACMSDQ8TDX5 336 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 EFHD2Q96C19 240 aaPredicted RBP16.73■□□□□ 0.27
CLN6-220ENST00000637450 POM121Q96HA1 1249 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 SFXN2Q96NB2 322 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 BBS4Q96RK4 519 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 YIPF4Q9BSR8 244 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 EBPLQ9BY08 206 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 PIGMQ9H3S5 423 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 GALNT8Q9NY28 637 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 DKKL1Q9UK85 242 aa16.73■□□□□ 0.27
CLN6-220ENST00000637450 GOLGA8RI6L899 631 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 RIPK2O43353 540 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 HCRTR2O43614 444 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 HRGP04196 525 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 GSTA1P08263 222 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 B3GALT5-AS1P59052 145 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 ADAM8P78325 824 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 MRPS22P82650 360 aaKnown RBP16.72■□□□□ 0.27
CLN6-220ENST00000637450 PSG6Q00889 435 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 C2orf80Q0P641 193 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 FOXD4Q12950 439 aaPredicted RBP16.72■□□□□ 0.27
CLN6-220ENST00000637450 PRSS53Q2L4Q9 553 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 GCNT2Q8N0V5 402 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLN6-220ENST00000637450 GSTO2Q9H4Y5 243 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 DLL4Q9NR61 685 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 TAS2R7Q9NYW3 318 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 SENP1Q9P0U3 644 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 RPH3AQ9Y2J0 694 aaPredicted RBP16.72■□□□□ 0.27
CLN6-220ENST00000637450 OR10H1Q9Y4A9 318 aa16.72■□□□□ 0.27
CLN6-220ENST00000637450 A0A087WV62 115 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 C17orf51A8MQB3 221 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 A8MXE2 369 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 UBFD1O14562 309 aaKnown RBP16.71■□□□□ 0.27
CLN6-220ENST00000637450 TNFSF13O75888 250 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 TGM6O95932 706 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 PYGBP11216 843 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 CPA2P48052 419 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 DIO3P55073 304 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 FOXA1P55317 472 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 DSCR4P56555 118 aaPredicted RBP16.71■□□□□ 0.27
CLN6-220ENST00000637450 ZNF763Q0D2J5 394 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 KEAP1Q14145 624 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 DEFB113Q30KQ7 82 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 SPDYAQ5MJ70 313 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 FAM71E1Q6IPT2 247 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 GRAMD2AQ8IUY3 354 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 FADS6Q8N9I5 356 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 DSN1Q9H410 356 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 MID1IP1Q9NPA3 183 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 PACSIN3Q9UKS6 424 aa16.71■□□□□ 0.27
CLN6-220ENST00000637450 C19orf53Q9UNZ5 99 aaPredicted RBP16.71■□□□□ 0.27
CLN6-220ENST00000637450 A0A1W2PNV4 684 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 SH3D21A4FU49 640 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 G3V2L1 256 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 FADS1O60427 444 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 COQ9O75208 318 aa16.7■□□□□ 0.26
CLN6-220ENST00000637450 SLITRK5O94991 958 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms