RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ZNF71Q9NQZ8 489 aaPredicted RBP14.75□□□□□ -0.05
CLN6-216ENST00000636876 HPF1Q9NWY4 346 aa14.75□□□□□ -0.05
CLN6-216ENST00000636876 ANKRD10Q9NXR5 420 aa14.75□□□□□ -0.05
CLN6-216ENST00000636876 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.75□□□□□ -0.05
CLN6-216ENST00000636876 CBLCQ9ULV8 474 aa14.75□□□□□ -0.05
CLN6-216ENST00000636876 COL6A6A6NMZ7 2263 aa14.75□□□□□ -0.05
CLN6-216ENST00000636876 DUXAA6NLW8 204 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 CLIC1O00299 241 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 DPM1O60762 260 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 PPM1BO75688 479 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 UNC5CO95185 931 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 PPIBP23284 216 aaKnown RBP14.74□□□□□ -0.05
CLN6-216ENST00000636876 PIGAP37287 484 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 CD97P48960 835 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 TMED10P49755 219 aaKnown RBP14.74□□□□□ -0.05
CLN6-216ENST00000636876 ANXA11P50995 505 aaKnown RBP14.74□□□□□ -0.05
CLN6-216ENST00000636876 MVDP53602 400 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 MRPS22P82650 360 aaKnown RBP14.74□□□□□ -0.05
CLN6-216ENST00000636876 TXNL4AP83876 142 aaKnown RBP14.74□□□□□ -0.05
CLN6-216ENST00000636876 COX20Q5RI15 118 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 ZNF227Q86WZ6 799 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 DND1Q8IYX4 353 aaKnown RBP14.74□□□□□ -0.05
CLN6-216ENST00000636876 HORMAD2Q8N7B1 307 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 COX18Q8N8Q8 333 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 MDS2Q8NDY4 140 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 OR52N2Q8NGI0 321 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 OR5D16Q8NGK9 328 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 PIK3R3Q92569 461 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 CDS1Q92903 461 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 RMND5BQ96G75 393 aaPredicted RBP14.74□□□□□ -0.05
CLN6-216ENST00000636876 SIGLEC12Q96PQ1 595 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 UBL7Q96S82 380 aaPredicted RBP14.74□□□□□ -0.05
CLN6-216ENST00000636876 CPPED1Q9BRF8 314 aaPredicted RBP14.74□□□□□ -0.05
CLN6-216ENST00000636876 BTBD2Q9BX70 525 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 RAD21L1Q9H4I0 556 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 ARL8BQ9NVJ2 186 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 GID8Q9NWU2 228 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 LRFN1Q9P244 771 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 CSAG2Q9Y5P2 127 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 GMEB1Q9Y692 573 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 KCNE3Q9Y6H6 103 aa14.74□□□□□ -0.05
CLN6-216ENST00000636876 FXYD1O00168 92 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 ASNA1O43681 348 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 TSPAN2O60636 221 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 REM1O75628 298 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 NEURL1O76050 574 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 AGR2O95994 175 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 NPPAP01160 153 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 PRB1P04280 392 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 KRT20P35900 424 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 TNFSF10P50591 281 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 POU6F2P78424 691 aaPredicted RBP14.73□□□□□ -0.05
CLN6-216ENST00000636876 LY6DQ14210 128 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 OR1C1Q15619 314 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 NTRK2Q16620 822 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 DECR1Q16698 335 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 RUNDC3AQ59EK9 446 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.73□□□□□ -0.05
CLN6-216ENST00000636876 RTL4Q6ZR62 310 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 RBMXL3Q8N7X1 1067 aaKnown RBP14.73□□□□□ -0.05
CLN6-216ENST00000636876 BCORP1Q8N888 145 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 CATSPER1Q8NEC5 780 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 LRRC58Q96CX6 371 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 SGCZQ96LD1 299 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 ANKRD27Q96NW4 1050 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 COL21A1Q96P44 957 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.73□□□□□ -0.05
CLN6-216ENST00000636876 SLC25A18Q9H1K4 315 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 PCDHGB3Q9Y5G1 929 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 CFAP46Q8IYW2 2715 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 EXPH5Q8NEV8 1989 aa14.73□□□□□ -0.05
CLN6-216ENST00000636876 FLNBO75369 2602 aaKnown RBP14.72□□□□□ -0.05
CLN6-216ENST00000636876 OR6C70A6NIJ9 312 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 AIM2O14862 343 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 ABCB7O75027 752 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 KCNK2O95069 426 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 IL33O95760 270 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 IGKV1D-16P01601 117 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 OR12D1P0DN82 309 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 ETFAP13804 333 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 IL12BP29460 328 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 CRATP43155 626 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 FBXW4P57775 412 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 CAPRIN1Q14444 709 aaKnown RBP14.72□□□□□ -0.05
CLN6-216ENST00000636876 KRT72Q14CN4 511 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 RGNQ15493 299 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 GOLM1Q8NBJ4 401 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 FAM13CQ8NE31 585 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 CHDHQ8NE62 594 aaPredicted RBP14.72□□□□□ -0.05
CLN6-216ENST00000636876 OR10G3Q8NGC4 313 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 FAM110BQ8TC76 370 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 XAGE5Q8WWM1 108 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 DIO2Q92813 273 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 RAB8BQ92930 207 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 ROPN1LQ96C74 230 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 ADOQ96SZ5 270 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 IKZF5Q9H5V7 419 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 EFCAB1Q9HAE3 211 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 EXD2Q9NVH0 621 aa14.72□□□□□ -0.05
CLN6-216ENST00000636876 TAGLN3Q9UI15 199 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms