RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 SLC44A2Q8IWA5 706 aaPredicted RBP16.78■□□□□ 0.28
CLN6-214ENST00000636314 OR10Q1Q8NGQ4 319 aa16.78■□□□□ 0.28
CLN6-214ENST00000636314 SLC35A4Q96G79 324 aa16.78■□□□□ 0.28
CLN6-214ENST00000636314 TSSK3Q96PN8 268 aa16.78■□□□□ 0.28
CLN6-214ENST00000636314 ADOQ96SZ5 270 aa16.78■□□□□ 0.28
CLN6-214ENST00000636314 TTYH2Q9BSA4 534 aa16.78■□□□□ 0.28
CLN6-214ENST00000636314 KCNJ16Q9NPI9 418 aa16.78■□□□□ 0.28
CLN6-214ENST00000636314 RAB21Q9UL25 225 aa16.78■□□□□ 0.28
CLN6-214ENST00000636314 MAPRE3Q9UPY8 281 aa16.78■□□□□ 0.28
CLN6-214ENST00000636314 ARHGAP21Q5T5U3 1957 aa16.78■□□□□ 0.28
CLN6-214ENST00000636314 SPG11Q96JI7 2443 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 PLOD2O00469 737 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 AKAP10O43572 662 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 ICOSLGO75144 302 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 BPGMP07738 259 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 HOXD4P09016 255 aaPredicted RBP16.77■□□□□ 0.28
CLN6-214ENST00000636314 PTPN6P29350 595 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 PTGDSP41222 190 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 HSPB3Q12988 150 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 ANKRD26P1Q6NSI1 321 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 LARP4Q71RC2 724 aaKnown RBP eCLIP16.77■□□□□ 0.28
CLN6-214ENST00000636314 CCDC71Q8IV32 467 aaPredicted RBP16.77■□□□□ 0.28
CLN6-214ENST00000636314 LILRB4Q8NHJ6 448 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 CLHC1Q8NHS4 586 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 PPP1R14CQ8TAE6 165 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 PPCDCQ96CD2 204 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 NTNG2Q96CW9 530 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 ZNF764Q96H86 408 aaPredicted RBP16.77■□□□□ 0.28
CLN6-214ENST00000636314 REEP4Q9H6H4 257 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 C19orf53Q9UNZ5 99 aaPredicted RBP16.77■□□□□ 0.28
CLN6-214ENST00000636314 PCDHGB3Q9Y5G1 929 aa16.77■□□□□ 0.28
CLN6-214ENST00000636314 C2orf72A6NCS6 295 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 UPK1AO00322 258 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 CTIFO43310 598 aaKnown RBP16.76■□□□□ 0.27
CLN6-214ENST00000636314 TSPAN2O60636 221 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 GLI4P10075 376 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 GPC1P35052 558 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 ETV4P43268 484 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 ASMTP46597 345 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 MRPS22P82650 360 aaKnown RBP16.76■□□□□ 0.27
CLN6-214ENST00000636314 PSG6Q00889 435 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 CRYZQ08257 329 aaKnown RBP16.76■□□□□ 0.27
CLN6-214ENST00000636314 ZNHIT3Q15649 155 aaPredicted RBP16.76■□□□□ 0.27
CLN6-214ENST00000636314 UGT3A2Q3SY77 523 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 EIPR1Q53HC9 387 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 CES4AQ5XG92 561 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 RTL6Q6ICC9 239 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 DMRTC2Q8IXT2 367 aaPredicted RBP16.76■□□□□ 0.27
CLN6-214ENST00000636314 ULK2Q8IYT8 1036 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 OR2L13Q8N349 312 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 ZFP28Q8NHY6 868 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 CIDECQ96AQ7 238 aaPredicted RBP16.76■□□□□ 0.27
CLN6-214ENST00000636314 EFHD2Q96C19 240 aaPredicted RBP16.76■□□□□ 0.27
CLN6-214ENST00000636314 ELP4Q96EB1 424 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 PPP3R2Q96LZ3 170 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 CENPHQ9H3R5 247 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 SLC6A5Q9Y345 797 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 WIF1Q9Y5W5 379 aa16.76■□□□□ 0.27
CLN6-214ENST00000636314 MAP1AP78559 2803 aaPredicted RBP16.75■□□□□ 0.27
CLN6-214ENST00000636314 TMEM114B3SHH9 223 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 FAM47E-STBD1D6RA91 191 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 SKAP2O75563 359 aaPredicted RBP16.75■□□□□ 0.27
CLN6-214ENST00000636314 TOXO94900 526 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 PSMG1O95456 288 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 TUBBP07437 444 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 IFI6P09912 130 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 CD99P14209 185 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 MSX1P28360 303 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 MAPK1P28482 360 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 ARRB2P32121 409 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 GCKP35557 465 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 SERPINB4P48594 390 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 PNLIPRP2P54317 469 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 TFF3Q07654 80 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 MYBPHQ13203 477 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 XKR7Q5GH72 579 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 WIPI1Q5MNZ9 446 aaPredicted RBP16.75■□□□□ 0.27
CLN6-214ENST00000636314 CEP85LQ5SZL2 805 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 ZNF551Q7Z340 670 aaPredicted RBP16.75■□□□□ 0.27
CLN6-214ENST00000636314 NUDCD3Q8IVD9 361 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 PM20D2Q8IYS1 436 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 FAM83FQ8NEG4 500 aaPredicted RBP16.75■□□□□ 0.27
CLN6-214ENST00000636314 OR4N2Q8NGD1 307 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 NRGNQ92686 78 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 DTNBP1Q96EV8 351 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 ZBED6CLQ96FA7 236 aaPredicted RBP16.75■□□□□ 0.27
CLN6-214ENST00000636314 PKNOX2Q96KN3 472 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 Q9N2J8 555 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 SERHLQ9NQF3 203 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 SH3BP4Q9P0V3 963 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 BAIAP2L1Q9UHR4 511 aa16.75■□□□□ 0.27
CLN6-214ENST00000636314 NIPBLQ6KC79 2804 aaeCLIP16.75■□□□□ 0.27
CLN6-214ENST00000636314 TBX19O60806 448 aa16.74■□□□□ 0.27
CLN6-214ENST00000636314 PEX11AO75192 247 aa16.74■□□□□ 0.27
CLN6-214ENST00000636314 BCKDHAP12694 445 aa16.74■□□□□ 0.27
CLN6-214ENST00000636314 DDX5P17844 614 aaKnown RBP16.74■□□□□ 0.27
CLN6-214ENST00000636314 DNAJA1P31689 397 aaKnown RBP16.74■□□□□ 0.27
CLN6-214ENST00000636314 HPCAL1P37235 193 aa16.74■□□□□ 0.27
CLN6-214ENST00000636314 PDE7AQ13946 482 aa16.74■□□□□ 0.27
CLN6-214ENST00000636314 ATP6AP1LQ52LC2 224 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms