RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 KCNK13Q9HB14 408 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 FOLH1BQ9HBA9 442 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 ACSS2Q9NR19 701 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 HEBP1Q9NRV9 189 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 SIDT1Q9NXL6 827 aaKnown RBP5.75□□□□□ -1.49
SCN1A-212ENST00000636194 DNAJB9Q9UBS3 223 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 LIPT1Q9Y234 373 aa5.75□□□□□ -1.49
SCN1A-212ENST00000636194 CAPN5O15484 640 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF44P15621 663 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF182P17025 639 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ADH7P40394 386 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ETV4P43268 484 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 PSMB2P49721 201 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 TOB1P50616 345 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CATR1Q13166 79 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF74Q16587 644 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 NKPD1Q17RQ9 610 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 FAM26DQ5JW98 314 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 MANEAQ5SRI9 462 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 IL34Q6ZMJ4 242 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SAMD7Q7Z3H4 446 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 OR14L1PQ8NHC6 308 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 STT3BQ8TCJ2 826 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SMPDL3AQ92484 453 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ANKRD9Q96BM1 317 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ITPAQ9BY32 194 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 B3GAT1Q9P2W7 334 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 FAM96BQ9Y3D0 163 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 KIAA1217Q5T5P2 1943 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 PPRC1Q5VV67 1664 aaKnown RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SPATA31E1Q6ZUB1 1445 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CUL9Q8IWT3 2517 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 TRAV6A0A075B6T7 132 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 FAM237BA0A1B0GVD1 139 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 B4DXG7 233 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 TXNDC12O95881 172 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 TMEM225BP0DP42 221 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CD79AP11912 226 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ICAM2P13598 275 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 GABRR1P24046 479 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SLC11A1P49279 550 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 HNRNPFP52597 415 aaKnown RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 EFNA3P52797 238 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CLCQ05315 142 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 NSDHLQ15738 373 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 REEP3Q6NUK4 255 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 AMIGO2Q86SJ2 522 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SERPINA9Q86WD7 417 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CARFQ8N187 725 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 DMBX1Q8NFW5 382 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 PRRT1Q99946 306 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ARL6Q9H0F7 186 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 LHX5Q9H2C1 402 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 KCMF1Q9P0J7 381 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 MAP2K7O14733 419 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 HOXA10P31260 410 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SHMT2P34897 504 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 KLK7P49862 253 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 POU6F2P78424 691 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 GPR33Q49SQ1 333 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ZMAT1Q5H9K5 638 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SULF2Q8IWU5 870 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 LMNTD1Q8N9Z9 388 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 GNPDA2Q8TDQ7 276 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 KIAA1191Q96A73 305 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 METTL2AQ96IZ6 378 aaKnown RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 AKR1E2Q96JD6 320 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 LURAP1Q96LR2 239 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 OR8D2Q9GZM6 311 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SACM1LQ9NTJ5 587 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CLDND1Q9NY35 253 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CHD1O14646 1710 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 APOC3P02656 99 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 LGALS2P05162 132 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 GAAP10253 952 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SLC25A6P12236 298 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 RHOQP17081 205 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 PRKACBP22694 351 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 MMP12P39900 470 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 FOLR3P41439 243 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ABCG1P45844 678 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 HSPA7P48741 367 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 POU3F4P49335 361 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 OR2T5Q6IEZ7 315 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 DCUN1D3Q8IWE4 304 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CISD2Q8N5K1 135 aaKnown RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 OR2T29Q8NH02 315 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 OR8K3Q8NH51 312 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 OR56B4Q8NH76 319 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 IMP4Q96G21 291 aaKnown RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 THOC3Q96J01 351 aaKnown RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CXorf21Q9HAI6 301 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 DZANK1Q9NVP4 752 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CASP8AP2Q9UKL3 1982 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 TRBV2A0A0J9YWF9 115 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 A0A1W2PPK0 400 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 STC2O76061 302 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 NPPAP01160 153 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 MMP3P08254 477 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ARP10275 920 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms