RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ZNF671Q8TAW3 534 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 FBXO25Q8TCJ0 367 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ACER1Q8TDN7 264 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SDR42E1Q8WUS8 393 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ITLN1Q8WWA0 313 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 PRCCQ92733 491 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 GGHQ92820 318 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 BADQ92934 168 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 TEKT1Q969V4 418 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 MRPL24Q96A35 216 aaKnown RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 NABP1Q96AH0 204 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ZBED6CLQ96FA7 236 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 DYNLL2Q96FJ2 89 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 PCED1BQ96HM7 432 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CDHR1Q96JP9 859 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CNOT6LQ96LI5 555 aaKnown RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 LURAP1Q96LR2 239 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CFAP53Q96M91 514 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ZIM3Q96PE6 472 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ERGIC2Q96RQ1 377 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 MCCC1Q96RQ3 725 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SERINC2Q96SA4 455 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CDX2Q99626 313 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 HSD17B14Q9BPX1 270 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 APOL2Q9BQE5 337 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ADPGKQ9BRR6 497 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CCDC28BQ9BUN5 200 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 PINK1Q9BXM7 581 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 EDEM3Q9BZQ6 932 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 DEFB129Q9H1M3 183 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 TNMDQ9H2S6 317 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 MMADHCQ9H3L0 296 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 C11orf49Q9H6J7 331 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 VIPAS39Q9H9C1 493 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ADGRL4Q9HBW9 690 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 TUFT1Q9NNX1 390 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 TIGARQ9NQ88 270 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 GDF3Q9NR23 364 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ABCB8Q9NUT2 735 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CWC25Q9NXE8 425 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 AATFQ9NY61 560 aaKnown RBP eCLIP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SPG21Q9NZD8 308 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 DHRS4-AS1Q9P1J3 65 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ARMCX1Q9P291 453 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 B4GALT7Q9UBV7 327 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SEC14L4Q9UDX3 406 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 NRBP1Q9UHY1 535 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF107Q9UII5 783 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ISY1Q9ULR0 285 aaKnown RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 GPR132Q9UNW8 380 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ERVK-19Q9WJR5 959 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 MRPL11Q9Y3B7 192 aaKnown RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 OR1A2Q9Y585 309 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 RANBP2P49792 3224 aaKnown RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 MYO3BQ8WXR4 1341 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SYNRGQ9UMZ2 1314 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 PHF3Q92576 2039 aaKnown RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SHANK1Q9Y566 2161 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 OTOGLQ3ZCN5 2332 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 RAI1Q7Z5J4 1906 aaPredicted RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 GOLGA4Q13439 2230 aaKnown RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ASXL3Q9C0F0 2248 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CACNA1AO00555 2505 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ROBO3Q96MS0 1386 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 TRBV5-4A0A0C4DH59 114 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 SMIM30A4D0T7 59 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 A4D1N5 150 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM149AA5PLN7 773 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 C5orf52A6NGY3 159 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC15A5A6NIM6 579 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 SDR42E2A6NKP2 422 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 SRRM5B3KS81 715 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ERVV-1B6SEH8 477 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CACNB4O00305 520 aaPredicted RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CCSO14618 274 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF263O14978 683 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CFLARO15519 480 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 PSMD3O43242 534 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 PRKAB2O43741 272 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 STX6O43752 255 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 SRPX2O60687 465 aaPredicted RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF354AO60765 605 aaPredicted RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 HSF2BPO75031 334 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF253O75346 499 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 NME6O75414 186 aaPredicted RBP0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 PRDM1O75626 825 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 TGDSO95455 350 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FGF19O95750 216 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 NUDT14O95848 222 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 PIGRP01833 764 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CA3P07451 260 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FHP07954 510 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 GSTA1P08263 222 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 FCGR3AP08637 254 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF286BP0CG31 522 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 ODC1P11926 461 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 CYBAP13498 195 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 P4HA1P13674 534 aa0.85□□□□□ -2.27
SMARCB1-209ENST00000635578 B4GALT1P15291 398 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms