RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 HRASLS5Q96KN8 279 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 DDOQ99489 341 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 SEPHS2Q99611 448 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 PRMT1Q99873 361 aaKnown RBP4.51□□□□□ -1.69
SDCBP-213ENST00000630925 P2RY13Q9BPV8 354 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 NICN1Q9BSH3 213 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 SYT11Q9BT88 431 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 ELOVL1Q9BW60 279 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 KATNBL1Q9H079 304 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 ADAMTS10Q9H324 1103 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 PIGMQ9H3S5 423 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 C1orf198Q9H425 327 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 PPP1R3EQ9H7J1 279 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 CHMP1AQ9HD42 196 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-213ENST00000630925 CD274Q9NZQ7 290 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 LRWD1Q9UFC0 647 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-213ENST00000630925 MMP24Q9Y5R2 645 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 AUP1Q9Y679 476 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 CEPT1Q9Y6K0 416 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 BTAF1O14981 1849 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 PLEKHH1Q9ULM0 1364 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 COL6A3P12111 3177 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 IFT172Q9UG01 1749 aa4.51□□□□□ -1.69
SDCBP-213ENST00000630925 COL5A2P05997 1499 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 OR6C68A6NDL8 312 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ANKUB1A6NFN9 424 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 A6NNC1 897 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 CXorf49A8MYA2 514 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 H3BN98 237 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 RFXANKO14593 260 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SLC9A3R1O14745 358 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 OR10H3O60404 316 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 WISP1O95388 367 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SYNGR4O95473 234 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 TNNC2P02585 160 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SPATA31C1P0DKV0 1188 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 CETPP11597 493 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 TACR1P25103 407 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 HMOX2P30519 316 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 AHRP35869 848 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 UGT2B10P36537 528 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 NAPAP54920 295 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 FOXC1Q12948 553 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 KNOP1Q1ED39 458 aaKnown RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 TMEM35AQ53FP2 167 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 PIGGQ5H8A4 983 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 TEX30Q5JUR7 227 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 BRMS1LQ5PSV4 323 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 FAM46CQ5VWP2 391 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SUSD4Q5VX71 490 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ZNF770Q6IQ21 691 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SLC8B1Q6J4K2 584 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 LRRC8EQ6NSJ5 796 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 C11orf63Q6NUN7 778 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 FUT10Q6P4F1 479 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 CD164L2Q6UWJ8 174 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 IRF2BP2Q7Z5L9 587 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 HAPLN4Q86UW8 402 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 TGIF2LXQ8IUE1 241 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 FAM71AQ8IYT1 594 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SYT14Q8NB59 555 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 NECAP1Q8NC96 275 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 GIPC3Q8TF64 312 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SETD7Q8WTS6 366 aaKnown RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ASB5Q8WWX0 329 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ACOT11Q8WXI4 607 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 DGCR14Q96DF8 476 aaKnown RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 IGSF21Q96ID5 467 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ZNF333Q96JL9 665 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 KLHDC3Q9BQ90 382 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 CDCP1Q9H5V8 836 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 CMTM6Q9NX76 183 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 FLRT1Q9NZU1 646 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 NYAP2Q9P242 653 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SAE1Q9UBE0 346 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 BCAP29Q9UHQ4 241 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SLC25A13Q9UJS0 675 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ANAPC7Q9UJX3 599 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 LSM4Q9Y4Z0 139 aaKnown RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 WNT6Q9Y6F9 365 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 PIK3C2AO00443 1686 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 A0A1W2PPK0 400 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 A0A1W2PQL4 384 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SH3PXD2BA1X283 911 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 C2orf74A8MZ97 194 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 NPIPB6E9PJ23 425 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 BTN3A3O00478 584 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 B3GAT3O94766 335 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 VNN1O95497 513 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ACTL6AO96019 429 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 GSTT2P0CG29 244 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 GSTT2BP0CG30 244 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 UBCP0CG48 685 aaKnown RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ENO3P13929 434 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 CYP11B1P15538 503 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ST6GAL1P15907 406 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 NDUFS1P28331 727 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms