RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ACOT9Q9Y305 439 aa18.11■□□□□ 0.49
TARDBP-228ENST00000629725 ZNF175Q9Y473 711 aa18.11■□□□□ 0.49
TARDBP-228ENST00000629725 SEC14L5O43304 696 aa18.1■□□□□ 0.49
TARDBP-228ENST00000629725 TSPAN2O60636 221 aa18.1■□□□□ 0.49
TARDBP-228ENST00000629725 PCSK2P16519 638 aa18.1■□□□□ 0.49
TARDBP-228ENST00000629725 GAS1P54826 345 aa18.1■□□□□ 0.49
TARDBP-228ENST00000629725 RPS4XP62701 263 aaKnown RBP18.1■□□□□ 0.49
TARDBP-228ENST00000629725 DUSP2Q05923 314 aa18.1■□□□□ 0.49
TARDBP-228ENST00000629725 GUSBP1Q15486 140 aa18.1■□□□□ 0.49
TARDBP-228ENST00000629725 LTB4RQ15722 352 aa18.1■□□□□ 0.49
TARDBP-228ENST00000629725 C10orf62Q5T681 223 aaPredicted RBP18.1■□□□□ 0.49
TARDBP-228ENST00000629725 C3orf62Q6ZUJ4 267 aa18.1■□□□□ 0.49
TARDBP-228ENST00000629725 KLHL29Q96CT2 875 aa18.1■□□□□ 0.49
TARDBP-228ENST00000629725 BTBD9Q96Q07 612 aa18.1■□□□□ 0.49
TARDBP-228ENST00000629725 PPP4R1LQ9P1A2 415 aa18.1■□□□□ 0.49
TARDBP-228ENST00000629725 ZNF337Q9Y3M9 751 aa18.1■□□□□ 0.49
TARDBP-228ENST00000629725 PCNX3Q9H6A9 2034 aa18.1■□□□□ 0.49
TARDBP-228ENST00000629725 UQCRHLA0A096LP55 91 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 C17orf51A8MQB3 221 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 CD5LO43866 347 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 ALDOAP04075 364 aaKnown RBP18.09■□□□□ 0.49
TARDBP-228ENST00000629725 CT45A8P0DMV1 189 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 CT45A9P0DMV2 189 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 HK1P19367 917 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 IDUAP35475 653 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 CT45A2Q5DJT8 189 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 FRG2Q64ET8 278 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 FAM180BQ6P0A1 224 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 LARP4Q71RC2 724 aaKnown RBP eCLIP18.09■□□□□ 0.49
TARDBP-228ENST00000629725 METTL4Q8N3J2 472 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 RNF138Q8WVD3 245 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 KCTD4Q8WVF5 259 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 AKAP1Q92667 903 aaKnown RBP eCLIP18.09■□□□□ 0.49
TARDBP-228ENST00000629725 ATP6V1E2Q96A05 226 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 TRMT61AQ96FX7 289 aaKnown RBP18.09■□□□□ 0.49
TARDBP-228ENST00000629725 FRG2BQ96QU4 278 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 TMEM204Q9BSN7 226 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 DSN1Q9H410 356 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 NOL11Q9H8H0 719 aaKnown RBP18.09■□□□□ 0.49
TARDBP-228ENST00000629725 SAYSD1Q9NPB0 183 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 YAE1D1Q9NRH1 226 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 TNPO3Q9Y5L0 923 aaKnown RBP18.09■□□□□ 0.49
TARDBP-228ENST00000629725 ZNF780BQ9Y6R6 833 aa18.09■□□□□ 0.49
TARDBP-228ENST00000629725 H3BML4 177 aa18.08■□□□□ 0.48
TARDBP-228ENST00000629725 LINC01387J3KSC0 135 aa18.08■□□□□ 0.48
TARDBP-228ENST00000629725 BCAS2O75934 225 aaPredicted RBP18.08■□□□□ 0.48
TARDBP-228ENST00000629725 SIX3O95343 332 aaPredicted RBP18.08■□□□□ 0.48
TARDBP-228ENST00000629725 PNLIPRP2P54317 469 aa18.08■□□□□ 0.48
TARDBP-228ENST00000629725 CLDN20P56880 219 aa18.08■□□□□ 0.48
TARDBP-228ENST00000629725 CORO7P57737 925 aa18.08■□□□□ 0.48
TARDBP-228ENST00000629725 FAM83EQ2M2I3 478 aa18.08■□□□□ 0.48
TARDBP-228ENST00000629725 TTC19Q6DKK2 380 aaPredicted RBP18.08■□□□□ 0.48
TARDBP-228ENST00000629725 STAC2Q6ZMT1 411 aa18.08■□□□□ 0.48
TARDBP-228ENST00000629725 COMMD6Q7Z4G1 85 aa18.08■□□□□ 0.48
TARDBP-228ENST00000629725 CENPLQ8N0S6 344 aaPredicted RBP18.08■□□□□ 0.48
TARDBP-228ENST00000629725 FADS6Q8N9I5 356 aa18.08■□□□□ 0.48
TARDBP-228ENST00000629725 OR52B6Q8NGF0 335 aa18.08■□□□□ 0.48
TARDBP-228ENST00000629725 GFM2Q969S9 779 aaKnown RBP18.08■□□□□ 0.48
TARDBP-228ENST00000629725 CNRIP1Q96F85 164 aaPredicted RBP18.08■□□□□ 0.48
TARDBP-228ENST00000629725 STMN4Q9H169 189 aaPredicted RBP18.08■□□□□ 0.48
TARDBP-228ENST00000629725 PLSCR4Q9NRQ2 329 aa18.08■□□□□ 0.48
TARDBP-228ENST00000629725 SNX24Q9Y343 169 aa18.08■□□□□ 0.48
TARDBP-228ENST00000629725 PRR14LQ5THK1 2151 aa18.08■□□□□ 0.48
TARDBP-228ENST00000629725 ANK2Q01484 3957 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 CCDC189A1A4V9 331 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 OR7A17O14581 309 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 FCGR2AP12318 317 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 TCP1P17987 556 aaKnown RBP18.07■□□□□ 0.48
TARDBP-228ENST00000629725 ALDH9A1P49189 494 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 CCNG1P51959 295 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 RPS3AP61247 264 aaKnown RBP18.07■□□□□ 0.48
TARDBP-228ENST00000629725 PSPHP78330 225 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 IRF9Q00978 393 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 OCRLQ01968 901 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 GANABQ14697 944 aaKnown RBP18.07■□□□□ 0.48
TARDBP-228ENST00000629725 SGCBQ16585 318 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 CHRFAM7AQ494W8 412 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 METTL2BQ6P1Q9 378 aaKnown RBP18.07■□□□□ 0.48
TARDBP-228ENST00000629725 WFDC8Q8IUA0 241 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 PPM1NQ8N819 430 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 OR2M3Q8NG83 312 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 OR5M1Q8NGP8 315 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 EFHD2Q96C19 240 aaPredicted RBP18.07■□□□□ 0.48
TARDBP-228ENST00000629725 TM4SF18Q96CE8 201 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 ZNF681Q96N22 645 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 ANKRA2Q9H9E1 313 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 EMC9Q9Y3B6 208 aa18.07■□□□□ 0.48
TARDBP-228ENST00000629725 OR2M5A3KFT3 312 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 OVOL3O00110 214 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 SCO2O43819 266 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 NME6O75414 186 aaPredicted RBP18.06■□□□□ 0.48
TARDBP-228ENST00000629725 AQP8O94778 261 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 F12P00748 615 aaPredicted RBP18.06■□□□□ 0.48
TARDBP-228ENST00000629725 EVI2BP34910 448 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 MRPS22P82650 360 aaKnown RBP18.06■□□□□ 0.48
TARDBP-228ENST00000629725 IFT88Q13099 833 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 ACAP2Q15057 778 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 ZNF628Q5EBL2 1059 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 METTL25Q8N6Q8 603 aa18.06■□□□□ 0.48
TARDBP-228ENST00000629725 OR6K3Q8NGY3 331 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms