RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SRP14P37108 136 aaKnown RBP12.36□□□□□ -0.43
SNX1-214ENST00000625244 BUD31P41223 144 aaPredicted RBP12.36□□□□□ -0.43
SNX1-214ENST00000625244 CDH11P55287 796 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 IRF9Q00978 393 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 PDCD2Q16342 344 aaPredicted RBP12.36□□□□□ -0.43
SNX1-214ENST00000625244 FBXO48Q5FWF7 155 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 RNASEH2BQ5TBB1 312 aaKnown RBP12.36□□□□□ -0.43
SNX1-214ENST00000625244 RAET1LQ5VY80 246 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 PPP4R4Q6NUP7 873 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 PDIK1LQ8N165 341 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 METTL25Q8N6Q8 603 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 NAT8LQ8N9F0 302 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 PIWIL2Q8TC59 973 aaKnown RBP12.36□□□□□ -0.43
SNX1-214ENST00000625244 GCDHQ92947 438 aaPredicted RBP12.36□□□□□ -0.43
SNX1-214ENST00000625244 PTCD3Q96EY7 689 aaKnown RBP12.36□□□□□ -0.43
SNX1-214ENST00000625244 GMPPAQ96IJ6 420 aaPredicted RBP12.36□□□□□ -0.43
SNX1-214ENST00000625244 ERP44Q9BS26 406 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 CAPS2Q9BXY5 557 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 ITPAQ9BY32 194 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 STMN4Q9H169 189 aaPredicted RBP12.36□□□□□ -0.43
SNX1-214ENST00000625244 PRM3Q9NNZ6 103 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 SLC17A6Q9P2U8 582 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 OARD1Q9Y530 152 aa12.36□□□□□ -0.43
SNX1-214ENST00000625244 NCF1BA6NI72 391 aaPredicted RBP12.35□□□□□ -0.43
SNX1-214ENST00000625244 NCF1CA8MVU1 366 aaPredicted RBP12.35□□□□□ -0.43
SNX1-214ENST00000625244 VWC2LB2RUY7 222 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 H3BML4 177 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 TAPBPO15533 448 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 GCM2O75603 506 aaPredicted RBP12.35□□□□□ -0.43
SNX1-214ENST00000625244 SEC31AO94979 1220 aaKnown RBP12.35□□□□□ -0.43
SNX1-214ENST00000625244 PLGP00747 810 aaPredicted RBP12.35□□□□□ -0.43
SNX1-214ENST00000625244 APEHP13798 732 aaKnown RBP12.35□□□□□ -0.43
SNX1-214ENST00000625244 NCF1P14598 390 aaPredicted RBP12.35□□□□□ -0.43
SNX1-214ENST00000625244 GRK2P25098 689 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 TTKP33981 857 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 CASP2P42575 452 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 DSCR4P56555 118 aaPredicted RBP12.35□□□□□ -0.43
SNX1-214ENST00000625244 SGCBQ16585 318 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNX1-214ENST00000625244 MIDNQ504T8 468 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 KHDRBS2Q5VWX1 349 aaKnown RBP12.35□□□□□ -0.43
SNX1-214ENST00000625244 RNF175Q8N4F7 328 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 OR7G1Q8NGA0 311 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 HSD17B8Q92506 261 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 KAT2AQ92830 837 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 GFM2Q969S9 779 aaKnown RBP12.35□□□□□ -0.43
SNX1-214ENST00000625244 ESAMQ96AP7 390 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 C3orf49Q96BT1 292 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 DTNBP1Q96EV8 351 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 TMEM79Q9BSE2 394 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 SOX7Q9BT81 388 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 DPH5Q9H2P9 285 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 C12orf49Q9H741 205 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 VWA7Q9Y334 891 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 ASB4Q9Y574 426 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 SNX8Q9Y5X2 465 aa12.35□□□□□ -0.43
SNX1-214ENST00000625244 IGHV4-61A0A0C4DH41 118 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 OR2M5A3KFT3 312 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 PLPP1O14494 284 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 PGRMC2O15173 223 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 TMPRSS11DO60235 418 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 NTN1O95631 604 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 NR2F6P10588 404 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 EPB42P16452 691 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 HK1P19367 917 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 GAS1P54826 345 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 ARL4CP56559 192 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 CAV1Q03135 178 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 TSNQ15631 228 aaKnown RBP12.34□□□□□ -0.43
SNX1-214ENST00000625244 GLE1Q53GS7 698 aaKnown RBP12.34□□□□□ -0.43
SNX1-214ENST00000625244 PAGE2BQ5JRK9 111 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 DEPDC1Q5TB30 811 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 MFSD12Q6NUT3 480 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 STK32CQ86UX6 486 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 GABRG1Q8N1C3 465 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 ZCCHC7Q8N3Z6 543 aaKnown RBP12.34□□□□□ -0.43
SNX1-214ENST00000625244 OR4K17Q8NGC6 315 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 TMCO6Q96DC7 493 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 COL21A1Q96P44 957 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 HBEGFQ99075 208 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 NAT9Q9BTE0 207 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 EFCAB11Q9BUY7 163 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 HDHD5Q9BXW7 423 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 PRRG4Q9BZD6 226 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 BHLHE41Q9C0J9 482 aaPredicted RBP12.34□□□□□ -0.43
SNX1-214ENST00000625244 OCEL1Q9H607 264 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 ZNF696Q9H7X3 374 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 CBLN4Q9NTU7 201 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 FBXO34Q9NWN3 711 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 SNX24Q9Y343 169 aa12.34□□□□□ -0.43
SNX1-214ENST00000625244 OR6C70A6NIJ9 312 aa12.33□□□□□ -0.44
SNX1-214ENST00000625244 FAM157AC9JC47 383 aa12.33□□□□□ -0.44
SNX1-214ENST00000625244 E7EQL1 145 aa12.33□□□□□ -0.44
SNX1-214ENST00000625244 ACOX3O15254 700 aa12.33□□□□□ -0.44
SNX1-214ENST00000625244 TMPRSS2O15393 492 aa12.33□□□□□ -0.44
SNX1-214ENST00000625244 EEDO75530 441 aaKnown RBP12.33□□□□□ -0.44
SNX1-214ENST00000625244 CSF3P09919 207 aa12.33□□□□□ -0.44
SNX1-214ENST00000625244 PCNAP12004 261 aa12.33□□□□□ -0.44
SNX1-214ENST00000625244 ZNF37AP17032 561 aaPredicted RBP12.33□□□□□ -0.44
SNX1-214ENST00000625244 EPORP19235 508 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms