RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 FAM183AA6NL82 134 aa14.3□□□□□ -0.12
PMS1-221ENST00000624204 ZNF593O00488 134 aaPredicted RBP14.3□□□□□ -0.12
PMS1-221ENST00000624204 CASC3O15234 703 aaKnown RBP14.3□□□□□ -0.12
PMS1-221ENST00000624204 CBSLP0DN79 551 aa14.3□□□□□ -0.12
PMS1-221ENST00000624204 CBSP35520 551 aa14.3□□□□□ -0.12
PMS1-221ENST00000624204 SLC6A11P48066 632 aa14.3□□□□□ -0.12
PMS1-221ENST00000624204 HSPB3Q12988 150 aa14.3□□□□□ -0.12
PMS1-221ENST00000624204 SNTB2Q13425 540 aaKnown RBP14.3□□□□□ -0.12
PMS1-221ENST00000624204 ETFDHQ16134 617 aa14.3□□□□□ -0.12
PMS1-221ENST00000624204 MPEG1Q2M385 716 aa14.3□□□□□ -0.12
PMS1-221ENST00000624204 TRMT10AQ8TBZ6 339 aaKnown RBP14.3□□□□□ -0.12
PMS1-221ENST00000624204 CLP1Q92989 425 aaKnown RBP14.3□□□□□ -0.12
PMS1-221ENST00000624204 CHFRQ96EP1 664 aa14.3□□□□□ -0.12
PMS1-221ENST00000624204 WBP1Q96G27 269 aa14.3□□□□□ -0.12
PMS1-221ENST00000624204 SLC6A17Q9H1V8 727 aa14.3□□□□□ -0.12
PMS1-221ENST00000624204 COPZ2Q9P299 210 aa14.3□□□□□ -0.12
PMS1-221ENST00000624204 WDR90Q96KV7 1748 aa14.3□□□□□ -0.12
PMS1-221ENST00000624204 NPIPB8E9PQR5 432 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 H3BNC9 293 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 GJB5O95377 273 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 CD160O95971 181 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 C4BPBP20851 252 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 DUSP4Q13115 394 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 GPR17Q13304 367 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 SMARCD3Q6STE5 483 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 PRSS45Q7RTY3 260 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 OAFQ86UD1 273 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 KLHL36Q8N4N3 616 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 HORMAD2Q8N7B1 307 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 IL17RCQ8NAC3 791 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 ACOT12Q8WYK0 555 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 FCRL4Q96PJ5 515 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 C12orf57Q99622 126 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 DPYSL5Q9BPU6 564 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 PRELID3BQ9Y3B1 194 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 ALPK2Q86TB3 2170 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 UNC80Q8N2C7 3258 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 ARHGEF33A8MVX0 844 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 GPR37L1O60883 481 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 SERPIND1P05546 499 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 NMBP08949 121 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 RING1Q06587 406 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 DSG2Q14126 1118 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 CCSMST1Q4G0I0 132 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 COMMD6Q7Z4G1 85 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 ZFPM2Q8WW38 1151 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 NPAS1Q99742 590 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 BRD9Q9H8M2 597 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 CFAP97Q9P2B7 532 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 MGAT4CQ9UBM8 478 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 LHX3Q9UBR4 397 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 GLS2Q9UI32 602 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 FZD7O75084 574 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 THPOP40225 353 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 GAS1P54826 345 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 SLC36A2Q495M3 483 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 CTXN3Q4LDR2 81 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 IGSF11Q5DX21 431 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 CXCL17Q6UXB2 119 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 ZNF280BQ86YH2 543 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 FBXO15Q8NCQ5 510 aaPredicted RBP14.29□□□□□ -0.12
PMS1-221ENST00000624204 WDR48Q8TAF3 677 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 PXYLP1Q8TE99 480 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 ADAM2Q99965 735 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 OR10A4Q9H209 315 aa14.29□□□□□ -0.12
PMS1-221ENST00000624204 EFCAB14O75071 495 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 KLK1P06870 262 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 DRD2P14416 443 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 CXCL2P19875 107 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 RBMS1P29558 406 aaKnown RBP14.28□□□□□ -0.12
PMS1-221ENST00000624204 BMP8BP34820 402 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 PREPP48147 710 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 LYPLAL1Q5VWZ2 237 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 HBMQ6B0K9 141 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 RETSATQ6NUM9 610 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 SLC27A4Q6P1M0 643 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 BMP8AQ7Z5Y6 402 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 LILRA3Q8N6C8 439 aaPredicted RBP14.28□□□□□ -0.12
PMS1-221ENST00000624204 XAGE5Q8WWM1 108 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 KCNK12Q9HB15 430 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 FGF20Q9NP95 211 aaPredicted RBP14.28□□□□□ -0.12
PMS1-221ENST00000624204 LIPT1Q9Y234 373 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 PPP2R3BQ9Y5P8 575 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 ZC3H12DA2A288 527 aaKnown RBP14.28□□□□□ -0.12
PMS1-221ENST00000624204 ANHXE9PGG2 379 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 CHST10O43529 356 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 B4GALNT1Q00973 533 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 PYHIN1Q6K0P9 492 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 RGS7BPQ6MZT1 257 aaPredicted RBP14.28□□□□□ -0.12
PMS1-221ENST00000624204 Q6ZTK2 550 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 RRM2BQ7LG56 351 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 FGD2Q7Z6J4 655 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 RSPO3Q9BXY4 272 aaPredicted RBP14.28□□□□□ -0.12
PMS1-221ENST00000624204 GSDMCQ9BYG8 508 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 FANCFQ9NPI8 374 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 ZDHHC3Q9NYG2 299 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 PLXNA4Q9HCM2 1894 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 RTCAO00442 366 aaKnown RBP14.28□□□□□ -0.12
PMS1-221ENST00000624204 SOX30O94993 753 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 ANKRD34CP0C6C1 535 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms