RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 VHLP40337 213 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 PPICP45877 212 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 CLCN2P51788 898 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 CRISP3P54108 245 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 RNF4P78317 190 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 LRRC23Q53EV4 343 aaPredicted RBP16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 CT45A2Q5DJT8 189 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 DCST2Q5T1A1 773 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 OLIG3Q7RTU3 272 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 MRGPREQ86SM8 312 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 ADIPOR1Q96A54 375 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 IMMP1LQ96LU5 166 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 TRNT1Q96Q11 434 aaKnown RBP16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 ZNF160Q9HCG1 818 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 S100A14Q9HCY8 104 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 FBXL4Q9UKA2 621 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 H6PDO95479 791 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 AK1P00568 194 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 ANPEPP15144 967 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 KDELR2P33947 212 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 ID4P47928 161 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 DCAF7P61962 342 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 AP2B1P63010 937 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 ARHGAP11BQ3KRB8 267 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 CCNJQ5T5M9 372 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 OR4N2Q8NGD1 307 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 LCORQ96JN0 433 aaPredicted RBP16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 TREX2Q9BQ50 279 aaPredicted RBP16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 EFHD1Q9BUP0 239 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 NXF5Q9H1B4 397 aaKnown RBP16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 RUBCNLQ9H714 662 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 P4HTMQ9NXG6 502 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 CALML5Q9NZT1 146 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 ANGPTL2Q9UKU9 493 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 ZNF451Q9Y4E5 1061 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 FRG2CA6NGY1 282 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 PEX12O00623 359 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 PGM3O95394 542 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 HPP00738 406 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 SERPINA1P01009 418 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 DRD5P21918 477 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 TRHRP34981 398 aaPredicted RBP16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 RFX3P48380 749 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 PCBP3P57721 371 aaKnown RBP16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 PLAG1Q6DJT9 500 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 FIGNL1Q6PIW4 674 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 LRRC74BQ6ZQY2 392 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 CCDC80Q76M96 950 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 CHDHQ8NE62 594 aaPredicted RBP16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 BBS10Q8TAM1 723 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 M1APQ8TC57 530 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 RSRC1Q96IZ7 334 aaKnown RBP16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 SDF2Q99470 211 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 CBLCQ9ULV8 474 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 MSRB2Q9Y3D2 182 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 PCSK5Q92824 1860 aa16.49■□□□□ 0.23
PTCHD3-202ENST00000622555 AQP12BA6NM10 295 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 GCM2O75603 506 aaPredicted RBP16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 ZFAND5O76080 213 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 KCNK2O95069 426 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 NR0B1P51843 470 aaKnown RBP16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 MRPS22P82650 360 aaKnown RBP16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 CLN3Q13286 438 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 ATP1A4Q13733 1029 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 MTX3Q5HYI7 312 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 PRAMEF8Q5VWM4 474 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 PRAMEF7Q5VXH5 474 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 PATL1Q86TB9 770 aaKnown RBP16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 AQP12AQ8IXF9 295 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 ZSCAN1Q8NBB4 408 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 OR8K3Q8NH51 312 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 ELP5Q8TE02 316 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 SLC26A7Q8TE54 656 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 ADAMTS17Q8TE56 1095 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 THAP3Q8WTV1 239 aaPredicted RBP16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 TACO1Q9BSH4 297 aaKnown RBP16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 DEFB126Q9BYW3 111 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 LIN28AQ9H9Z2 209 aaKnown RBP16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 BCL2L10Q9HD36 194 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 A0A0G2JPF8 293 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 CDC14CA4D256 554 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 HNRNPCL2B2RXH8 293 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 HNRNPCL3B7ZW38 293 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 M0QX08 132 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 PDE9AO76083 593 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 CELA2AP08217 269 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 HNRNPCL4P0DMR1 293 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 PIGAP37287 484 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 CHRNEQ04844 493 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 CYP27C1Q4G0S4 372 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 KRT73Q86Y46 540 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 BCORP1Q8N888 145 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 ZNF441Q8N8Z8 693 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 OR5L2Q8NGL0 311 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 NUBPLQ8TB37 319 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 NAF1Q96HR8 494 aaKnown RBP16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 ZNF570Q96NI8 536 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 IP6K3Q96PC2 410 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 ZNF607Q96SK3 696 aa16.48■□□□□ 0.23
PTCHD3-202ENST00000622555 SLC38A1Q9H2H9 487 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms