RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ITM2AO43736 263 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 ERN1O75460 977 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 REM1O75628 298 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 HPNP05981 417 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 LINC00032P0C843 101 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 PTPN6P29350 595 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 NCBP2P52298 156 aaKnown RBP eCLIP16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 C1orf185Q5T7R7 199 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 SLC30A6Q6NXT4 461 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 ANGPTL8Q6UXH0 198 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 ACBD4Q8NC06 268 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 OR10Q1Q8NGQ4 319 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 METTL2AQ96IZ6 378 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 TRIM8Q9BZR9 551 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 GLIPR2Q9H4G4 154 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 LRTM1Q9HBL6 345 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 C1orf109Q9NX04 203 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 ZDHHC2Q9UIJ5 367 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 DNAJC15Q9Y5T4 150 aa16.4■□□□□ 0.22
SCAMP4-213ENST00000621748 C15orf38-AP3S2A0A0A6YYH1 394 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 A0A0G2JNJ9 132 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 OR6C70A6NIJ9 312 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 TRPC5OSA6NMA1 111 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 FAM90A27PA6NNH2 459 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 TMEM233B4DJY2 109 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 TSPAN2O60636 221 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 TOXO94900 526 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 KITP10721 976 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 ADH7P40394 386 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 MC3RP41968 323 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 GUCY1A3Q02108 690 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 TFF3Q07654 80 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 CRYZQ08257 329 aaKnown RBP16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 SNTA1Q13424 505 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 EIPR1Q53HC9 387 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 KANK2Q63ZY3 851 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 RNF165Q6ZSG1 346 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 IKBIPQ70UQ0 350 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 ULK2Q8IYT8 1036 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 ZNF781Q8N8C0 355 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 OR4N2Q8NGD1 307 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 OR1J4Q8NGS1 313 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 TWIST2Q8WVJ9 160 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 SLC35A4Q96G79 324 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 FCRL1Q96LA6 429 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 AMDHD1Q96NU7 426 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 COL21A1Q96P44 957 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 ADOQ96SZ5 270 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 TIMP4Q99727 224 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 SPOCK3Q9BQ16 436 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 OSBPL11Q9BXB4 747 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 ENKD1Q9H0I2 346 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 TAS2R9Q9NYW1 312 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 Q9UFV3 132 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 SLC6A5Q9Y345 797 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 PCDHGB3Q9Y5G1 929 aa16.39■□□□□ 0.21
SCAMP4-213ENST00000621748 TACC2O95359 2948 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 A0A087WV62 115 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 PRAMEF25A6NGN4 478 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 UPK1AO00322 258 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 SNPHO15079 494 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 SNNO75324 88 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 HOXD4P09016 255 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 GABRA1P14867 456 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 ELAVL4P26378 380 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 ARRB2P32121 409 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 PSG6Q00889 435 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 TOMM20Q15388 145 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 UGT3A2Q3SY77 523 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 RFTN2Q52LD8 501 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 WIPI1Q5MNZ9 446 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 ANKRD26P1Q6NSI1 321 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 TMEM107Q6UX40 140 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 SEM1Q6ZVN7 128 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 GDF7Q7Z4P5 450 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 LURAP1LQ8IV03 231 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 LIX1LQ8IVB5 337 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 SLC44A2Q8IWA5 706 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 WDSUB1Q8N9V3 476 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 PIWIL2Q8TC59 973 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 GFM2Q969S9 779 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 C7orf26Q96N11 449 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 NPDC1Q9NQX5 325 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 KLRF1Q9NZS2 232 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 C19orf53Q9UNZ5 99 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 MAPRE3Q9UPY8 281 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 CSMD2Q7Z408 3487 aa16.38■□□□□ 0.21
SCAMP4-213ENST00000621748 PCNX3Q9H6A9 2034 aa16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 KDM4EB2RXH2 506 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 PLOD2O00469 737 aa16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 LSM1O15116 133 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 SKAP2O75563 359 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 TROVE2P10155 538 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 SDC1P18827 310 aa16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 NTSP30990 170 aa16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 PDCD2Q16342 344 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 VASNQ6EMK4 673 aa16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 MEX3BQ6ZN04 569 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 LARP4Q71RC2 724 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCAMP4-213ENST00000621748 YRDCQ86U90 279 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms