RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 DUSP7Q16829 419 aa17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 ATAD3BQ5T9A4 648 aa17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 FOXB2Q5VYV0 432 aa17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 FIGNL1Q6PIW4 674 aa17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 FKBP9P1Q75LS8 142 aa17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 SLC30A8Q8IWU4 369 aa17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 COX18Q8N8Q8 333 aa17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 WDR36Q8NI36 951 aaKnown RBP17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 POP5Q969H6 163 aaKnown RBP17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 ADPRHL2Q9NX46 363 aa17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 MKLN1Q9UL63 735 aa17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 PCDHGA8Q9Y5G5 932 aa17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 AK5Q9Y6K8 562 aa17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 CNOT1A5YKK6 2376 aaKnown RBP17.27■□□□□ 0.35
SEMA6C-210ENST00000621728 PRAMEF25A6NGN4 478 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 hCG_2039718K7EN88 272 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 DLGAP3O95886 979 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 SEMG1P04279 462 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 IGKV3-11P04433 115 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 CSRP1P21291 193 aaKnown RBP17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 KCNJ10P78508 379 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 ZAR1Q86SH2 424 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 PATL1Q86TB9 770 aaKnown RBP17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 COMTD1Q86VU5 262 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 CHERPQ8IWX8 916 aaKnown RBP17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 GALNT4Q8N4A0 578 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 GPR32P1Q8NGA4 272 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 HOXB13Q92826 284 aaPredicted RBP17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 C9orf16Q9BUW7 83 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 SPRY4Q9C004 299 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 EXD2Q9NVH0 621 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 UBAP1Q9NZ09 502 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 CEP250Q9BV73 2442 aa17.26■□□□□ 0.35
SEMA6C-210ENST00000621728 CENPVL1A0A0U1RR11 272 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 DUXAA6NLW8 204 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 DIRAS1O95057 198 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 NKX2-2O95096 273 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 MFN2O95140 757 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 UMODP07911 640 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 CD247P20963 164 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 OR1E2P47887 323 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 NOVA1P51513 510 aaKnown RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 SELENOWP63302 87 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 VLDLRP98155 873 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 NCF4Q15080 339 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 ARHGAP11BQ3KRB8 267 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 DCST2Q5T1A1 773 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 ZCCHC12Q6PEW1 402 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 C6orf15Q6UXA7 325 aaPredicted RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 FRRS1Q6ZNA5 592 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 ZBTB49Q6ZSB9 765 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 RMND5BQ96G75 393 aaPredicted RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 CENPNQ96H22 339 aaPredicted RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 ZNF578Q96N58 590 aaPredicted RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 TRNT1Q96Q11 434 aaKnown RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 SDF2Q99470 211 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 LMF2Q9BU23 707 aaKnown RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 DOHHQ9BU89 302 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 DUSP22Q9NRW4 184 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 AGPAT4Q9NRZ5 378 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 ABCG2Q9UNQ0 655 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 PTRH2Q9Y3E5 179 aaKnown RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 GPC6Q9Y625 555 aaPredicted RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 PTPRBP23467 1997 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 NPIPA5A0A0B4J1W7 369 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 C9J4A7 227 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 NPIPA7E9PJI5 369 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 KLF7O75840 302 aaPredicted RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 TNFSF15O95150 251 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 CLPTM1O96005 669 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 SMIM18P0DKX4 95 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 NPIPA8P0DM63 369 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 CT45A8P0DMV1 189 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 CT45A9P0DMV2 189 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 HOXB6P17509 224 aaKnown RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 RFX3P48380 749 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 RNF144AP50876 292 aaPredicted RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 RPS18P62269 152 aaKnown RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 EIF3IQ13347 325 aaKnown RBP17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 CT45A2Q5DJT8 189 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 GALNT15Q8N3T1 639 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 ZSCAN1Q8NBB4 408 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 OR14A16Q8NHC5 309 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 BBS10Q8TAM1 723 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 METTL21AQ8WXB1 218 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 LMF1Q96S06 567 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 STACQ99469 402 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 WFDC6Q9BQY6 131 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 ZPBPQ9BS86 351 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 WDR54Q9H977 334 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 BCL2L10Q9HD36 194 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 LIPT1Q9Y234 373 aa17.25■□□□□ 0.35
SEMA6C-210ENST00000621728 NINQ8N4C6 2090 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 SEC24DO94855 1032 aaPredicted RBP17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 IGKV1D-16P01601 117 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 CDK4P11802 303 aa17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 POU6F2P78424 691 aaPredicted RBP17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 TYW3Q6IPR3 259 aaKnown RBP17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 TSEN54Q7Z6J9 526 aaKnown RBP17.24■□□□□ 0.35
SEMA6C-210ENST00000621728 CARM1Q86X55 608 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms