RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 COQ5Q5HYK3 327 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 H3F3CQ6NXT2 135 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 FAM219AQ8IW50 185 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 C17orf78Q8N4C9 275 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 DCAF13Q9NV06 445 aaKnown RBP4.78□□□□□ -1.64
VPS13D-214ENST00000620676 MYH15Q9Y2K3 1946 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 M0QYG6 137 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 M0R3H8 397 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 ADAM12O43184 909 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 BRINP1O60477 761 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 AMY2BP19961 511 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 ATP4BP51164 291 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 VARS2Q5ST30 1063 aaKnown RBP4.78□□□□□ -1.64
VPS13D-214ENST00000620676 FRMD1Q8N878 549 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 OR10D4PQ8NGN7 298 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 OR4K13Q8NH42 304 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 OR51A7Q8NH64 312 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 AIG1Q9NVV5 245 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 SHPRHQ149N8 1683 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 CROCCQ5TZA2 2017 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 DCTN6O00399 190 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 MMP7P09237 267 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-214ENST00000620676 EPCAMP16422 314 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 PPIBP23284 216 aaKnown RBP4.78□□□□□ -1.64
VPS13D-214ENST00000620676 CTBSQ01459 385 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 CACNG1Q06432 222 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 CD163Q86VB7 1156 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 TOP6BLQ8N6T0 577 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 LMNTD1Q8N9Z9 388 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 NIPAL2Q9H841 368 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 MYH3P11055 1940 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF98A6NK75 572 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 GYPBP06028 91 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 LPLP06858 475 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 HSD3B1P14060 373 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 PNPLA4P41247 253 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 OR3A2P47893 321 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 MFSD10Q14728 455 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 YOD1Q5VVQ6 348 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-214ENST00000620676 LRFN4Q6PJG9 635 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 TAC4Q86UU9 113 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 GJD3Q8N144 294 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 LINC00471Q8N535 108 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 HHIPQ96QV1 700 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 B3GAT2Q9NPZ5 323 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 RBFOX1Q9NWB1 397 aaKnown RBP4.78□□□□□ -1.64
VPS13D-214ENST00000620676 HMX2A2RU54 273 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 HSPA12AO43301 675 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 OLIG3Q7RTU3 272 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF679Q8IYX0 411 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 CYB561A3Q8NBI2 242 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 GNPDA2Q8TDQ7 276 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 LIN7BQ9HAP6 207 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 HECW2Q9P2P5 1572 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 ALKQ9UM73 1620 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 A0A087X0M5 115 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 SMIM28A0A1B0GU29 152 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 A0A1B0GX30 115 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 FEZF1A0PJY2 475 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 ADM5C9JUS6 153 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 SLC43A1O75387 559 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 IFNA2P01563 188 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF44P15621 663 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 XAF1Q6GPH4 301 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 SCLYQ96I15 445 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 TMEM27Q9HBJ8 222 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 VPS29Q9UBQ0 182 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 GPR25O00155 361 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 PPP1R2P9O14990 202 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 PTAFRP25105 342 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 ASAH1Q13510 395 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 CHRFAM7AQ494W8 412 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 HACD2Q6Y1H2 254 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 LRRC70Q7Z2Q7 622 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 MFSD6LQ8IWD5 586 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 CSGALNACT1Q8TDX6 532 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 SMIM14Q96QK8 99 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 CNTNAP3Q9BZ76 1288 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 SPACA1Q9HBV2 294 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 VSX1Q9NZR4 365 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-214ENST00000620676 CYB5BO43169 146 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 PCDH7O60245 1069 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 RBBP9O75884 186 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 IFNA21P01568 189 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 PRPS1L1P21108 318 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 CLCN7P51798 805 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 METTL7BQ6UX53 244 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 ANKK1Q8NFD2 765 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 OR8J3Q8NGG0 315 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 OR8J2Q8NGG1 315 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 OR8D4Q8NGM9 314 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 ZBED6CLQ96FA7 236 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-214ENST00000620676 DDX31Q9H8H2 851 aaKnown RBP4.78□□□□□ -1.64
VPS13D-214ENST00000620676 TRBV2A0A0J9YWF9 115 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 RNF13O43567 381 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 DUSP7Q16829 419 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 XKR4Q5GH76 650 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 S100A7AQ86SG5 101 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 SYT9Q86SS6 491 aa4.78□□□□□ -1.64
VPS13D-214ENST00000620676 TMEM41AQ96HV5 264 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms