RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 BEX5Q5H9J7 111 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 PDSS1Q5T2R2 415 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 AFMIDQ63HM1 303 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 METAP1DQ6UB28 335 aaPredicted RBP9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 QSOX2Q6ZRP7 698 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 FGD2Q7Z6J4 655 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 ZNF784Q8NCA9 323 aaPredicted RBP9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 ZDHHC1Q8WTX9 485 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 TNFAIP8L1Q8WVP5 186 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 WNT2BQ93097 391 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 SLC38A3Q99624 504 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 DPH7Q9BTV6 452 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 FAIM2Q9BWQ8 316 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 SHARPINQ9H0F6 387 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 OR51V1Q9H2C8 321 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 SLC25A19Q9HC21 320 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 RCE1Q9Y256 329 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 E7EQ34 232 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 SGK494L7N484 410 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 FRS3O43559 492 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 FKTNO75072 461 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 PTP4A3O75365 173 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 S100A6P06703 90 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 KLK1P06870 262 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 MANFP55145 182 aaKnown RBP9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 CDC42EP1Q00587 391 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 DUSP4Q13115 394 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 ILKQ13418 452 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 NFATC2Q13469 925 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 PUM1Q14671 1186 aaKnown RBP eCLIP9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 C3orf38Q5JPI3 329 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 HDDC3Q8N4P3 179 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 FCRL1Q96LA6 429 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 ADAT1Q9BUB4 502 aaKnown RBP9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 CRB3Q9BUF7 120 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 TEX12Q9BXU0 123 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 KCNK12Q9HB15 430 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 IL17CQ9P0M4 197 aa9.22□□□□□ -0.93
TNFAIP3-210ENST00000620204 A0A1B0GW55 424 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 SLC9B1P1A6NJY1 282 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 K7ERQ8 282 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 SCN2BO60939 215 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 SEMG1P04279 462 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 DUX4L2P0CJ85 424 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 DUX4L3P0CJ86 424 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 DUX4L4P0CJ87 422 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 DUX4L5P0CJ88 424 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 DUX4L6P0CJ89 424 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 DUX4L7P0CJ90 424 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 OR12D1P0DN82 309 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 PIPP12273 146 aaPredicted RBP9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 ASMTP46597 345 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 POLR2GP62487 172 aaKnown RBP eCLIP9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 FGL1Q08830 312 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 ZNF385BQ569K4 471 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 SPIN4Q56A73 249 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 REEP3Q6NUK4 255 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 PODNL1Q6PEZ8 512 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 Q6ZTK2 550 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 CFAP206Q8IYR0 622 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 FAM181AQ8N9Y4 354 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 SCMH1Q96GD3 660 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 RNF32Q9H0A6 362 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 NIT2Q9NQR4 276 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 GKN1Q9NS71 199 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 CXXC1Q9P0U4 656 aaPredicted RBP9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 RPS6KB2Q9UBS0 482 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 DUX4Q9UBX2 424 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 LRFN2Q9ULH4 789 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 LOC285556D6RIA3 1793 aa9.21□□□□□ -0.93
TNFAIP3-210ENST00000620204 TTLL8A6PVC2 850 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 H3BSH0 61 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 ZNF593O00488 134 aaPredicted RBP9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 ETHE1O95571 254 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 IGLV3-25P01717 112 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 NMBP08949 121 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 SNRPGP62308 76 aaKnown RBP9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 CNTN1Q12860 1018 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 MPEG1Q2M385 716 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 PLBD1Q6P4A8 553 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 LRRC28Q86X40 367 aaPredicted RBP9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 TMEM185AQ8NFB2 350 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 OR8J2Q8NGG1 315 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 WDR20Q8TBZ3 569 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 ADAMTS14Q8WXS8 1223 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 MCOLN1Q9GZU1 580 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 TMEM168Q9H0V1 697 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 WDR26Q9H7D7 661 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 EVA1AQ9H8M9 152 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 CSNK1G1Q9HCP0 422 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 IL26Q9NPH9 171 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 SLC22A11Q9NSA0 550 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 PLXNA1Q9UIW2 1896 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 HTTP42858 3142 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 LINC00587B1AMM8 73 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 REM1O75628 298 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 ADRB1P08588 477 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 IDSP22304 550 aa9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 ELAVL4P26378 380 aaKnown RBP9.21□□□□□ -0.94
TNFAIP3-210ENST00000620204 AHRP35869 848 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms