RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 LIPJQ5W064 366 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 AADACL2Q6P093 401 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 MED27Q6P2C8 311 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 KLHL17Q6TDP4 642 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 C17orf78Q8N4C9 275 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 CNEP1R1Q8N9A8 125 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 LINC01356Q8N9X3 169 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 C1orf162Q8NEQ5 155 aaPredicted RBP4.07□□□□□ -1.76
SNCA-213ENST00000618500 KBTBD8Q8NFY9 601 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 RAB3IL1Q8TBN0 382 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 ZNF669Q96BR6 464 aaPredicted RBP4.07□□□□□ -1.76
SNCA-213ENST00000618500 S100PBPQ96BU1 408 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 PYCR2Q96C36 320 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 MTBPQ96DY7 904 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 CENPKQ9BS16 269 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 KLHL4Q9C0H6 718 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 BCO1Q9HAY6 547 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 SERHLQ9NQF3 203 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 NSMCE4AQ9NXX6 385 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 KLHL13Q9P2N7 655 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 GDF2Q9UK05 429 aaPredicted RBP4.07□□□□□ -1.76
SNCA-213ENST00000618500 TCRBV7S2A1N4TA0A589 114 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 FAM234BA2RU67 622 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 DPRXA6NFQ7 191 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 WASHC1A8K0Z3 465 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 KIF2AO00139 706 aaPredicted RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 FADS1O60427 444 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 WDR47O94967 919 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 LRATO95237 230 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 PTAFRP25105 342 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 PTX3P26022 381 aaPredicted RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 DPP4P27487 766 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 CDKN1AP38936 164 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 HNF4AP41235 474 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 PLCXD2Q0VAA5 305 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 GALNT1Q10472 559 aaPredicted RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 DOC2AQ14183 400 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 ZNF267Q14586 743 aaPredicted RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 TSC22D1Q15714 1073 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 EFNB3Q15768 340 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 BICRALQ6AI39 1079 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 PLXDC2Q6UX71 529 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 ESPNLQ6ZVH7 1005 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 WFDC8Q8IUA0 241 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 FBXL14Q8N1E6 418 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 MAPK1IP1LQ8NDC0 245 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 TRIM58Q8NG06 486 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 ACTRT2Q8TDY3 377 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 TRPC4APQ8TEL6 797 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 MSI2Q96DH6 328 aaKnown RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 SIGLEC10Q96LC7 697 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 GAL3ST4Q96RP7 486 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 BHLHE41Q9C0J9 482 aaPredicted RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 WDR41Q9HAD4 459 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 IKZF3Q9UKT9 509 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 CES1P1Q9UKY3 287 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 MCTS1Q9ULC4 181 aaKnown RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 MMP24Q9Y5R2 645 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 SLC35F4A4IF30 521 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 ZNF724A8MTY0 619 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 CXorf49A8MYA2 514 aaPredicted RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 ETV2O00321 342 aaPredicted RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 PLPP1O14494 284 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 TAPBPO15533 448 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 UGT2B11O75310 529 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 GUCY1B2O75343 617 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 PRKRAO75569 313 aaKnown RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 VENTXO95231 258 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 DHRS4L1P0CG22 281 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 CPMP14384 443 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 HK1P19367 917 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 PSMA4P25789 261 aaKnown RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 GABRB3P28472 473 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 SSR2P43308 183 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 OR3A2P47893 321 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 SUCLG1P53597 346 aaKnown RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 PLA2G16P53816 162 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 CTBP2P56545 445 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 ATP6V0D1P61421 351 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 CRADDP78560 199 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 BSPH1Q075Z2 132 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 MMEL1Q495T6 779 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 ARL13AQ5H913 290 aaPredicted RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 ZNF662Q6ZS27 426 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 Q6ZT83 130 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 BHLHA15Q7RTS1 189 aaPredicted RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 PEX26Q7Z412 305 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 C1QL2Q7Z5L3 287 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 CCDC91Q7Z6B0 441 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 SAMD14Q8IZD0 417 aaPredicted RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 GTPBP8Q8N3Z3 284 aaPredicted RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 F2RL3Q96RI0 385 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 NXF5Q9H1B4 397 aaKnown RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 C20orf96Q9NUD7 363 aaPredicted RBP4.06□□□□□ -1.76
SNCA-213ENST00000618500 NUDT4Q9NZJ9 180 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 MAT2BQ9NZL9 334 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 KLRF1Q9NZS2 232 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 PRDM4Q9UKN5 801 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 ACOT9Q9Y305 439 aa4.06□□□□□ -1.76
SNCA-213ENST00000618500 TRRAPQ9Y4A5 3859 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms