RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 EID3Q8N140 333 aa14.63□□□□□ -0.07
BRCA1-228ENST00000618469 OR7A2PQ8NGA2 310 aa14.63□□□□□ -0.07
BRCA1-228ENST00000618469 OR4N2Q8NGD1 307 aa14.63□□□□□ -0.07
BRCA1-228ENST00000618469 EFHD2Q96C19 240 aaPredicted RBP14.63□□□□□ -0.07
BRCA1-228ENST00000618469 SLC35A4Q96G79 324 aa14.63□□□□□ -0.07
BRCA1-228ENST00000618469 TMEM41AQ96HV5 264 aa14.63□□□□□ -0.07
BRCA1-228ENST00000618469 ADOQ96SZ5 270 aa14.63□□□□□ -0.07
BRCA1-228ENST00000618469 SLC6A15Q9H2J7 730 aa14.63□□□□□ -0.07
BRCA1-228ENST00000618469 GALNT9Q9HCQ5 603 aa14.63□□□□□ -0.07
BRCA1-228ENST00000618469 TNFRSF10DQ9UBN6 386 aa14.63□□□□□ -0.07
BRCA1-228ENST00000618469 ATP6V1HQ9UI12 483 aa14.63□□□□□ -0.07
BRCA1-228ENST00000618469 EIF3LQ9Y262 564 aaKnown RBP14.63□□□□□ -0.07
BRCA1-228ENST00000618469 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.63□□□□□ -0.07
BRCA1-228ENST00000618469 TRGV5A0A0B4J1U4 118 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 OR6C70A6NIJ9 312 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 GNB5O14775 395 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 ABCB7O75027 752 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 TACC2O95359 2948 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 IFI6P09912 130 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 FRKP42685 505 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-228ENST00000618469 MANFP55145 182 aaKnown RBP14.62□□□□□ -0.07
BRCA1-228ENST00000618469 ADORA2A-AS1P86434 159 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 ART3Q13508 389 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 ZNHIT3Q15649 155 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-228ENST00000618469 TMEM81Q6P7N7 255 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 ANGPTL8Q6UXH0 198 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 MRGPRGQ86SM5 289 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 ZNF808Q8N4W9 903 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-228ENST00000618469 KRTCAP2Q8N6L1 136 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 TMCO6Q96DC7 493 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 MS4A4EQ96PG1 132 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 NUF2Q9BZD4 464 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 TP63Q9H3D4 680 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-228ENST00000618469 Q9N2J8 555 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 ACSS1Q9NUB1 689 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-228ENST00000618469 QPCTLQ9NXS2 382 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 NOP53Q9NZM5 478 aaKnown RBP14.62□□□□□ -0.07
BRCA1-228ENST00000618469 HAO1Q9UJM8 370 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 C15orf41Q9Y2V0 281 aa14.62□□□□□ -0.07
BRCA1-228ENST00000618469 NCOA6Q14686 2063 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-228ENST00000618469 DNAJC13O75165 2243 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 A0A1B0GVC2 190 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 OR14I1A6ND48 311 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 E9PLN8 166 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 AQP7O14520 342 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 TSPAN2O60636 221 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 HCN1O60741 890 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 G6PDP11413 515 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 ENDOUP21128 410 aaKnown RBP14.61□□□□□ -0.07
BRCA1-228ENST00000618469 PTGDSP41222 190 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 RFX3P48380 749 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 TRPC1P48995 793 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 EFR3AQ14156 821 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 TOMM20Q15388 145 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 CPTPQ5TA50 214 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 FNDC7Q5VTL7 733 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 SLC30A6Q6NXT4 461 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 ZNF295-AS1Q8N0V1 137 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 OR5M9Q8NGP3 310 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 FBXO30Q8TB52 745 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 GNRHR2Q96P88 292 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 VKORC1Q9BQB6 163 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 TRIM8Q9BZR9 551 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 AKTIPQ9H8T0 292 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 PNPLA3Q9NST1 481 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 ATAD3AQ9NVI7 634 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 PNPOQ9NVS9 261 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 ASIC5Q9NY37 505 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 SPRR3Q9UBC9 169 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 MAPRE3Q9UPY8 281 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 NF1P21359 2839 aa14.61□□□□□ -0.07
BRCA1-228ENST00000618469 C2orf72A6NCS6 295 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 ADAM10O14672 748 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 BCKDKO14874 412 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 SNPHO15079 494 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 SUSD5O60279 629 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 ICOSLGO75144 302 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 TRAPPC6AO75865 159 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 LAMP1P11279 417 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 PRPS1L1P21108 318 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 SMSP52788 366 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 SLC18A1P54219 525 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 PRKAG1P54619 331 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 EMX2Q04743 252 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 SNTA1Q13424 505 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 EMC4Q5J8M3 183 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 AGBL2Q5U5Z8 902 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 TIGD3Q6B0B8 471 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 NUP43Q8NFH3 380 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 OR1J4Q8NGS1 313 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 PHF10Q8WUB8 498 aaKnown RBP14.6□□□□□ -0.07
BRCA1-228ENST00000618469 NUDT8Q8WV74 236 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 ARL8AQ96BM9 186 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 SARAFQ96BY9 339 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 DMRTA2Q96SC8 542 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 LMF2Q9BU23 707 aaKnown RBP14.6□□□□□ -0.07
BRCA1-228ENST00000618469 UBQLN3Q9H347 655 aa14.6□□□□□ -0.07
BRCA1-228ENST00000618469 ARGLU1Q9NWB6 273 aaPredicted RBP14.6□□□□□ -0.07
BRCA1-228ENST00000618469 MARCOQ9UEW3 520 aaPredicted RBP14.6□□□□□ -0.07
BRCA1-228ENST00000618469 ACAD8Q9UKU7 415 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms