RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 LPAR4Q99677 370 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 FUT8Q9BYC5 575 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 TXLNGYQ9BZA5 131 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 NT5DC2Q9H857 520 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 NMRAL1Q9HBL8 299 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 MMP25Q9NPA2 562 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 DMRT3Q9NQL9 472 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 PRTFDC1Q9NRG1 225 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 FARSBQ9NSD9 589 aaKnown RBP4.23□□□□□ -1.73
CUL3-216ENST00000617432 DEPPQ9NTK1 212 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 OLAHQ9NV23 265 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 STMN3Q9NZ72 180 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 TMEM216Q9P0N5 145 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 OPTCQ9UBM4 332 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 PLEKHB1Q9UF11 243 aaPredicted RBP4.23□□□□□ -1.73
CUL3-216ENST00000617432 C19orf25Q9UFG5 118 aaPredicted RBP4.23□□□□□ -1.73
CUL3-216ENST00000617432 ZNF225Q9UK10 706 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 DAPP1Q9UN19 280 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 ACOT9Q9Y305 439 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 PTPN13Q12923 2485 aa4.23□□□□□ -1.73
CUL3-216ENST00000617432 FLNBO75369 2602 aaKnown RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 TRAV17A0A0B4J275 112 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 A0A1W2PPM1 405 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 DYTNA2CJ06 578 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 ANKDD1BA6NHY2 528 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 A8MT66 165 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 NPIPA5E9PKD4 350 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 PSMD12O00232 456 aaPredicted RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 WWP2O00308 870 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 PCDH17O14917 1159 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 LRRTM2O43300 516 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 RIPK2O43353 540 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 OR6B1O95007 311 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 RASAL1O95294 804 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 DDAH2O95865 285 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 CLPSP04118 112 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 INHBAP08476 426 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 RPS17P08708 135 aaKnown RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 CHN1P15882 459 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 HIST1H1TP22492 207 aaPredicted RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 JAK1P23458 1154 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 CALRP27797 417 aaKnown RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 SSR2P43308 183 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 MASP1P48740 699 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 MTTPP55157 894 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 MLF1P58340 268 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 STXBP1P61764 594 aaKnown RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 OC90Q02509 493 aaPredicted RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 TRAF3Q13114 568 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 SLAMF1Q13291 335 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 EXT1Q16394 746 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 C3AR1Q16581 482 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 MEP1AQ16819 746 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 SGO1Q5FBB7 561 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 KHDRBS2Q5VWX1 349 aaKnown RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 MED27Q6P2C8 311 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 TRIM40Q6P9F5 258 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 VWA1Q6PCB0 445 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 SCIMPQ6UWF3 145 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 GFRALQ6UXV0 394 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 C3P1Q6ZMU1 363 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 RPS19BP1Q86WX3 136 aaKnown RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 LAS2Q8IYD9 372 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 KRT78Q8N1N4 520 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 RPRMLQ8N4K4 120 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 ACOT4Q8N9L9 421 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 TOR1AIP2Q8NFQ8 470 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 OR4F6Q8NGB9 312 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 WDR20Q8TBZ3 569 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 M1APQ8TC57 530 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 PTPMT1Q8WUK0 201 aaPredicted RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 NR4A3Q92570 626 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 SCMH1Q96GD3 660 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 FAR2Q96K12 515 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 TMEM237Q96Q45 408 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 KCNA7Q96RP8 456 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 SERINC2Q96SA4 455 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 EFCAB11Q9BUY7 163 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 MRPL1Q9BYD6 325 aaKnown RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 EHD1Q9H4M9 534 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 GSTO2Q9H4Y5 243 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 NOL11Q9H8H0 719 aaKnown RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 ACTR8Q9H981 624 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 COPS7BQ9H9Q2 264 aaPredicted RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 SEMA4BQ9NPR2 832 aaPredicted RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 TEX10Q9NXF1 929 aaPredicted RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 MTRF1LQ9UGC7 380 aaKnown RBP4.22□□□□□ -1.73
CUL3-216ENST00000617432 SLC23A1Q9UHI7 598 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 TINAGQ9UJW2 476 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 PCTPQ9UKL6 214 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 EMCNQ9ULC0 261 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 NPIPA1Q9UND3 350 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 ATG4BQ9Y4P1 393 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 LIPGQ9Y5X9 500 aa4.22□□□□□ -1.73
CUL3-216ENST00000617432 A0A087WUV0 522 aaPredicted RBP4.21□□□□□ -1.73
CUL3-216ENST00000617432 A0A0A6YYD5 115 aa4.21□□□□□ -1.73
CUL3-216ENST00000617432 TRGV8A0A0C4DH27 118 aa4.21□□□□□ -1.73
CUL3-216ENST00000617432 EXOC1LA0A1B0GW35 172 aa4.21□□□□□ -1.73
CUL3-216ENST00000617432 SMIM23A6NLE4 172 aa4.21□□□□□ -1.73
CUL3-216ENST00000617432 FAM166BA8MTA8 275 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms