RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 OR5K4A6NMS3 321 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 H7C1Q1 480 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 SCAMP2O15127 329 aaKnown RBP12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 LRRTM2O43300 516 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 IFNA6P05013 189 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 PTAFRP25105 342 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 CLCNKAP51800 687 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 NDUFA6P56556 154 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 ESPNLQ6ZVH7 1005 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 TTLL10Q6ZVT0 673 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 PHYKPLQ8IUZ5 450 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 NKD1Q969G9 470 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 CMTM7Q96FZ5 175 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 KLHL9Q9P2J3 617 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 RREB1Q92766 1687 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 ZNF142P52746 1687 aaPredicted RBP12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 SMIM28A0A1B0GU29 152 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 A0A1W2PRQ8 180 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 KCNK5O95279 499 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 LIPCP11150 499 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 SDC1P18827 310 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 POU3F2P20265 443 aaPredicted RBP12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 BIKQ13323 160 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 RGNQ15493 299 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 ZNF674Q2M3X9 581 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 OR52H1Q8NGJ2 320 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 KHSRPQ92945 711 aaKnown RBP eCLIP12.84□□□□□ -0.353e-7■■■■□ 23.8
PPP4R3B-205ENST00000616288 MEGF10Q96KG7 1140 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 NMUR1Q9HB89 426 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 ENTPD4Q9Y227 616 aa12.84□□□□□ -0.35
PPP4R3B-205ENST00000616288 WASH4PA8MWX3 477 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 ITGBL1O95965 494 aaPredicted RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 ETV5P41161 510 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 ART1P52961 327 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 RPS27AP62979 156 aaKnown RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 UBA52P62987 128 aaKnown RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 PIN1Q13526 163 aaPredicted RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 RIN1Q13671 783 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 C3orf33Q6P1S2 294 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 NANOGP1Q8N7R0 232 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 FAM98AQ8NCA5 519 aaKnown RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 ZFPM2Q8WW38 1151 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 PDLIM5Q96HC4 596 aaKnown RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 UNKLQ9H9P5 680 aaKnown RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 ACSS1Q9NUB1 689 aaPredicted RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 MARCH2Q9P0N8 246 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 THP07101 528 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 FABP5Q01469 135 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 C14orf28Q4W4Y0 310 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 EIF5AL1Q6IS14 154 aaKnown RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 KCT2Q8NC54 265 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 CLP1Q92989 425 aaKnown RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 SEC22AQ96IW7 307 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 PITX2Q99697 317 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 SH2B3Q9UQQ2 575 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 MEIS3P1A6NDR6 274 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 PEX10O60683 326 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 LATS1O95835 1130 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 MT-ND5P03915 603 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 RBMS1P29558 406 aaKnown RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 PCP4P48539 62 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 BACE1P56817 501 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 RGS8P57771 180 aaPredicted RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 ZNF630Q2M218 657 aaPredicted RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 GPR33Q49SQ1 333 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 PRPF38BQ5VTL8 546 aaKnown RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 FBXO15Q8NCQ5 510 aaPredicted RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR4K5Q8NGD3 323 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR52N1Q8NH53 320 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 LINC01599Q8WXQ3 324 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 NXF2Q9GZY0 626 aaKnown RBP12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 SYNPO2LQ9H987 977 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 B3GAT2Q9NPZ5 323 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 SLC25A13Q9UJS0 675 aa12.83□□□□□ -0.36
PPP4R3B-205ENST00000616288 SLC9B1P1A6NJY1 282 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 CRYBA1P05813 215 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 CRYBB2P43320 205 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 WDR5P61964 334 aaKnown RBP12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 EEF1A1P68104 462 aaKnown RBP12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 EEF1A2Q05639 463 aaKnown RBP12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 VEZF1Q14119 521 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 XKR7Q5GH72 579 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 EEF1A1P5Q5VTE0 462 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 ATRAIDQ6UW56 229 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 LINGO4Q6UY18 593 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 RNF175Q8N4F7 328 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 ACBD7Q8N6N7 88 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR14K1Q8NGZ2 314 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 DUSP19Q8WTR2 217 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 SPOCK3Q9BQ16 436 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 C20orf24Q9BUV8 137 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 PTDSS2Q9BVG9 487 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 PIGMQ9H3S5 423 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 ANKRD19PQ9H560 264 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 SMCO4Q9NRQ5 59 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 AHSPQ9NZD4 102 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR7A17O14581 309 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 ITGA10O75578 1167 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 MPC2O95563 127 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 SMIM6P0DI80 62 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms