RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SLC2A10O95528 541 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 IGSF6O95976 241 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 ACP2P11117 423 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 ATP1B2P14415 290 aaPredicted RBP6.29□□□□□ -1.4
LMO3-235ENST00000616247 AHRP35869 848 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 STXBP1P61764 594 aaKnown RBP6.29□□□□□ -1.4
LMO3-235ENST00000616247 BTG1P62324 171 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 CAMK2DQ13557 499 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 FAAP20Q6NZ36 180 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 CRTC1Q6UUV9 634 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 FAM198BQ6UWH4 519 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 Q6ZVL8 140 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 LRRTM4Q86VH4 590 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 CPOQ8IVL8 374 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 STPG2Q8N412 459 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 FAM181AQ8N9Y4 354 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 FBXO15Q8NCQ5 510 aaPredicted RBP6.29□□□□□ -1.4
LMO3-235ENST00000616247 OR4D11Q8NGI4 311 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 WFDC5Q8TCV5 224 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 FUBP3Q96I24 572 aaKnown RBP eCLIP6.29□□□□□ -1.4
LMO3-235ENST00000616247 OR2M2Q96R28 347 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 GPA33Q99795 319 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 FAIM2Q9BWQ8 316 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 POLDIP3Q9BY77 421 aaKnown RBP6.29□□□□□ -1.4
LMO3-235ENST00000616247 MCOLN1Q9GZU1 580 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 DLL4Q9NR61 685 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 ZCCHC3Q9NUD5 404 aaKnown RBP6.29□□□□□ -1.4
LMO3-235ENST00000616247 SPATA6Q9NWH7 488 aaPredicted RBP6.29□□□□□ -1.4
LMO3-235ENST00000616247 SCP2D1Q9UJQ7 156 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 CHST2Q9Y4C5 530 aa6.29□□□□□ -1.4
LMO3-235ENST00000616247 LCTP09848 1927 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 QSOX1O00391 747 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 TSPAN6O43657 245 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 STC2O76061 302 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 CBX7O95931 251 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 RB1P06400 928 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 UCHL1P09936 223 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 PRG2P13727 222 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 SLC6A12P48065 614 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 AP1S2P56377 157 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 AP1S1P61966 158 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 B4GALNT1Q00973 533 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 TAP2Q03519 686 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 RING1Q06587 406 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 PCDH1Q08174 1060 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 DUSP6Q16828 381 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 C3orf38Q5JPI3 329 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 CD276Q5ZPR3 534 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 FCRLBQ6BAA4 426 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 PLBD1Q6P4A8 553 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 METAP1DQ6UB28 335 aaPredicted RBP6.28□□□□□ -1.4
LMO3-235ENST00000616247 RPTNQ6XPR3 784 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 CXXC5Q7LFL8 322 aaKnown RBP6.28□□□□□ -1.4
LMO3-235ENST00000616247 NLRC3Q7RTR2 1065 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 FAM26EQ8N5C1 309 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 RELL2Q8NC24 303 aaPredicted RBP6.28□□□□□ -1.4
LMO3-235ENST00000616247 PXYLP1Q8TE99 480 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 ZC3HAV1LQ96H79 300 aaKnown RBP6.28□□□□□ -1.4
LMO3-235ENST00000616247 IL17FQ96PD4 163 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 ZNF436Q9C0F3 470 aaPredicted RBP6.28□□□□□ -1.4
LMO3-235ENST00000616247 BHLHE41Q9C0J9 482 aaPredicted RBP6.28□□□□□ -1.4
LMO3-235ENST00000616247 GHITMQ9H3K2 345 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 HEXA-AS1Q9H8Q6 139 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 WASH6PQ9NQA3 447 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 STOX2Q9P2F5 926 aaPredicted RBP6.28□□□□□ -1.4
LMO3-235ENST00000616247 PLAGL1Q9UM63 463 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 RCE1Q9Y256 329 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 NUBP2Q9Y5Y2 271 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 ARPC4-TTLL3A0A0A6YYG9 625 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 SGK494L7N484 410 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 HYAL3O43820 417 aaPredicted RBP6.28□□□□□ -1.4
LMO3-235ENST00000616247 DPM1O60762 260 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 EFCAB14O75071 495 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 CLTBP09497 229 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 FURINP09958 794 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 CBSLP0DN79 551 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 PTHLHP12272 177 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 PDHA2P29803 388 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 OR1D2P34982 312 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 CBSP35520 551 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 RFX3P48380 749 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 PXNP49023 591 aaPredicted RBP6.28□□□□□ -1.4
LMO3-235ENST00000616247 HMGA2P52926 109 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 UBE2MP61081 183 aaKnown RBP6.28□□□□□ -1.4
LMO3-235ENST00000616247 RAB40BQ12829 278 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 GPR17Q13304 367 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 KCNC3Q14003 757 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 LASP1Q14847 261 aaKnown RBP6.28□□□□□ -1.4
LMO3-235ENST00000616247 OCLNQ16625 522 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 HYAL4Q2M3T9 481 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 SLC25A35Q3KQZ1 300 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 GGTA1PQ4G0N0 100 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 PLA1AQ53H76 456 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 ARHGAP15Q53QZ3 475 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 C12orf73Q69YU5 71 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 LRFN4Q6PJG9 635 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 LRRC28Q86X40 367 aaPredicted RBP6.28□□□□□ -1.4
LMO3-235ENST00000616247 ADGRG3Q86Y34 549 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 TRAPPC5Q8IUR0 188 aa6.28□□□□□ -1.4
LMO3-235ENST00000616247 CFAP206Q8IYR0 622 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms