RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 SLC37A3Q8NCC5 494 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 HNRNPABQ99729 332 aaKnown RBP12.03□□□□□ -0.48
TCF4-248ENST00000616053 HOXD1Q9GZZ0 328 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 LIN7CQ9NUP9 197 aaKnown RBP12.03□□□□□ -0.48
TCF4-248ENST00000616053 TMEM248Q9NWD8 314 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 CHRNA9Q9UGM1 479 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 EMP3P54852 163 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 FBXO46Q6PJ61 603 aaPredicted RBP12.03□□□□□ -0.48
TCF4-248ENST00000616053 SCAMP5Q8TAC9 235 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 SLC38A5Q8WUX1 472 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 NRKQ7Z2Y5 1582 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 CASZ1Q86V15 1759 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 MKRN2OSH3BPM6 223 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 FANCGO15287 622 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 TRIM23P36406 574 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 RPL5P46777 297 aaKnown RBP12.03□□□□□ -0.48
TCF4-248ENST00000616053 BTNL3Q6UXE8 466 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 LHFPL3Q86UP9 236 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 SGPP2Q8IWX5 399 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 OR10X1Q8NGY0 326 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 ZNF296Q8WUU4 475 aaPredicted RBP12.03□□□□□ -0.48
TCF4-248ENST00000616053 EDAQ92838 391 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 DCLRE1CQ96SD1 692 aaKnown RBP12.03□□□□□ -0.48
TCF4-248ENST00000616053 CD163L1Q9NR16 1453 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 FAM149AA5PLN7 773 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 UNC119BA6NIH7 251 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 CD83Q01151 205 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 CCL14Q16627 93 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 RPL13AP3Q6NVV1 102 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 TMEM151AQ8N4L1 468 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 DOK4Q8TEW6 326 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 RPF2Q9H7B2 306 aaKnown RBP12.03□□□□□ -0.48
TCF4-248ENST00000616053 OR2J3O76001 311 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 MAOAP21397 527 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 BDKRB2P30411 391 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 PTCRAQ6ISU1 281 aaPredicted RBP12.02□□□□□ -0.48
TCF4-248ENST00000616053 PCDHA9Q9Y5H5 950 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 TRAV6A0A075B6T7 132 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 hCG_1818297A0A087WSY0 165 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 ALOX15BO15296 676 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 NIPSNAP2O75323 286 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 GPIP06744 558 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 CD1CP29017 333 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 CST6Q15828 149 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 OR6C4Q8NGE1 309 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 CALHM2Q9HA72 323 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 TRNAU1APQ9NX07 287 aaKnown RBP12.02□□□□□ -0.48
TCF4-248ENST00000616053 UBQLN2Q9UHD9 624 aa12.02□□□□□ -0.48
TCF4-248ENST00000616053 PMM2O15305 246 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 PRAMEF2O60811 474 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 ADRB2P07550 413 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 NFATC4Q14934 902 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 ASRGL1Q7L266 308 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 WFDC8Q8IUA0 241 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 DEFB123Q8N688 67 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 OR5K1Q8NHB7 308 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 CXXC1Q9P0U4 656 aaPredicted RBP12.02□□□□□ -0.49
TCF4-248ENST00000616053 KLRC4O43908 158 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 C6orf47O95873 294 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 C5AR1P21730 350 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 HOXD12P35452 270 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 PRKXP51817 358 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 RPS18P62269 152 aaKnown RBP12.02□□□□□ -0.49
TCF4-248ENST00000616053 RPL7AP62424 266 aaKnown RBP12.02□□□□□ -0.49
TCF4-248ENST00000616053 SIM1P81133 766 aaPredicted RBP12.02□□□□□ -0.49
TCF4-248ENST00000616053 KCNC3Q14003 757 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 OR4F3Q6IEY1 312 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 FAM217AQ8IXS0 508 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 OR7G2Q8NG99 324 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 DCAF16Q9NXF7 216 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 ZNF609O15014 1411 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 MYH4Q9Y623 1939 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 WASH4PA8MWX3 477 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 NMBRP28336 390 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 HMGCS1Q01581 520 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 CATR1Q13166 79 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 DUOXA1Q1HG43 343 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 RNF130Q86XS8 419 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 HSPB6O14558 160 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 MEF2AQ02078 507 aaPredicted RBP12.02□□□□□ -0.49
TCF4-248ENST00000616053 KLF1Q13351 362 aaPredicted RBP12.02□□□□□ -0.49
TCF4-248ENST00000616053 AGTRAPQ6RW13 159 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 NLRC3Q7RTR2 1065 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 RHEBL1Q8TAI7 183 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 RAB8BQ92930 207 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 CLEC1BQ9P126 229 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 NKX1-2Q9UD57 310 aaPredicted RBP12.02□□□□□ -0.49
TCF4-248ENST00000616053 KLHL21Q9UJP4 597 aa12.02□□□□□ -0.49
TCF4-248ENST00000616053 NOSIPQ9Y314 301 aaKnown RBP12.02□□□□□ -0.49
TCF4-248ENST00000616053 TRBV2A0A0J9YWF9 115 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 F10P00742 488 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 SHC2P98077 582 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 OR7A5Q15622 319 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 RTP3Q9BQQ7 232 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 HSFX1Q9UBD0 423 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 TCRBV9S1A1TA0A576 114 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 OR5K3A6NET4 321 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 DNASE2O00115 360 aaPredicted RBP12.01□□□□□ -0.49
TCF4-248ENST00000616053 LEFTY1O75610 366 aa12.01□□□□□ -0.49
TCF4-248ENST00000616053 SPP1P10451 314 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms