RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 PCDHGA7Q9Y5G6 932 aa16.52■□□□□ 0.23
HMGXB3-206ENST00000613459 IGKV6D-21A0A0A0MT36 114 aa16.52■□□□□ 0.23
HMGXB3-206ENST00000613459 A0A1W2PPK0 400 aa16.52■□□□□ 0.23
HMGXB3-206ENST00000613459 CSF1P09603 554 aa16.52■□□□□ 0.23
HMGXB3-206ENST00000613459 FAM205BPQ63HN1 556 aa16.52■□□□□ 0.23
HMGXB3-206ENST00000613459 NOXA1Q86UR1 476 aa16.52■□□□□ 0.23
HMGXB3-206ENST00000613459 DNAJC22Q8N4W6 341 aa16.52■□□□□ 0.23
HMGXB3-206ENST00000613459 ZNF417Q8TAU3 575 aa16.52■□□□□ 0.23
HMGXB3-206ENST00000613459 LRRC15Q8TF66 581 aa16.52■□□□□ 0.23
HMGXB3-206ENST00000613459 TRIB2Q92519 343 aa16.52■□□□□ 0.23
HMGXB3-206ENST00000613459 UTP4Q969X6 686 aaKnown RBP16.52■□□□□ 0.23
HMGXB3-206ENST00000613459 INPP5EQ9NRR6 644 aa16.52■□□□□ 0.23
HMGXB3-206ENST00000613459 F8W036 122 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 SSX4O60224 188 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 CRYZL1O95825 349 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 NUDT1P36639 197 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 BLOC1S1P78537 153 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 ELOAQ14241 798 aaKnown RBP16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 FAM182AQ5T1J6 154 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 COMMD6Q7Z4G1 85 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 ACBD4Q8NC06 268 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 OR6C4Q8NGE1 309 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 WDR20Q8TBZ3 569 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 TRMT10AQ8TBZ6 339 aaKnown RBP16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 SMG9Q9H0W8 520 aaKnown RBP16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 DNTTIP1Q9H147 329 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 ZNF442Q9H7R0 627 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 FZD3Q9NPG1 666 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 RARRES3Q9UL19 164 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 G3V2L1 256 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 MAOAP21397 527 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 MAGEA6P43360 314 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 SF3A2Q15428 464 aaKnown RBP16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 CST6Q15828 149 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 SFRP4Q6FHJ7 346 aaPredicted RBP16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 LEG1Q6P5S2 330 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 FIGLAQ6QHK4 219 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 OR1F2PQ96R84 312 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 ZCWPW2A0A1B0GU75 182 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 ARNTLO00327 626 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 ATE1O95260 518 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 RAB33AQ14088 237 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 RSU1Q15404 277 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 RTL6Q6ICC9 239 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 SLC5A8Q8N695 610 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 GATSQ8NAP1 163 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 DPH2Q9BQC3 489 aaPredicted RBP16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 HDHD5Q9BXW7 423 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 KLHL13Q9P2N7 655 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 WASH4PA8MWX3 477 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 NME4O00746 187 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 ZNF217O75362 1048 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 ETFAP13804 333 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 DLSTP36957 453 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 ERVPABLB-1P60509 514 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 GPRIN1Q7Z2K8 1008 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 TMPRSS9Q7Z410 1059 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 MRPL10Q7Z7H8 261 aaKnown RBP16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 OR52B6Q8NGF0 335 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 NDNFQ8TB73 568 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 SNAPC3Q92966 411 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 PITX2Q99697 317 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 APOBEC3BQ9UH17 382 aaKnown RBP16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 CACNG2Q9Y698 323 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 A0A1W2PQL4 384 aaPredicted RBP16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 M0QZQ0 153 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 T-ENOLP0DO92 83 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 IVDP26440 423 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 GPR4P46093 362 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 CASP6P55212 293 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 SF3B4Q15427 424 aaKnown RBP eCLIP16.51■□□□□ 0.231e-6■■■■□ 22.3
HMGXB3-206ENST00000613459 KIAA0895LQ68EN5 471 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 TRIM46Q7Z4K8 759 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 TANKQ92844 425 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 FOXJ1Q92949 421 aa16.51■□□□□ 0.23
HMGXB3-206ENST00000613459 UGT2B7P16662 529 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 HNRNPKP61978 463 aaKnown RBP eCLIP16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 SOX4Q06945 474 aaPredicted RBP16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 PTPRRQ15256 657 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 C1orf220Q5T0J3 134 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 UEVLDQ8IX04 471 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 MALSU1Q96EH3 234 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 COQ10AQ96MF6 247 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 ZNF587Q96SQ5 575 aaPredicted RBP16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 CYP8B1Q9UNU6 501 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 MAS1P04201 325 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 AMY2AP04746 511 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 OR8U9P0C7N5 309 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 IRF2P14316 349 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 JUNDP17535 347 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 NTSR1P30989 418 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 CNR2P34972 360 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 SLC35F2Q8IXU6 374 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 IL17RCQ8NAC3 791 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 KDM1BQ8NB78 822 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 ANKK1Q8NFD2 765 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 BEST4Q8NFU0 473 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 OR6Q1Q8NGQ2 317 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 SFXN5Q8TD22 340 aa16.5■□□□□ 0.23
HMGXB3-206ENST00000613459 MRPL15Q9P015 296 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms