RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 MOAP1Q96BY2 351 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 MVB12BQ9H7P6 319 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SCUBE2Q9NQ36 999 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PARPBPQ9NWS1 579 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 KCMF1Q9P0J7 381 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SERPINA7P05543 415 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 YBX3P16989 372 aaKnown RBP eCLIP4.71□□□□□ -1.665e-8■■□□□ 14.5
VPS13D-213ENST00000613099 FABP6P51161 128 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CLDN20P56880 219 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 UFM1P61960 85 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 LRRC32Q14392 662 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 KCNAB1Q14722 419 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 GGNBP1Q5YKI7 109 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 OR52W1Q6IF63 320 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 NPNTQ6UXI9 565 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 HS3ST5Q8IZT8 346 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PLEKHM1Q9Y4G2 1056 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF236Q9UL36 1845 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 NRAPQ86VF7 1730 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 KHNYNO15037 678 aaKnown RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 MED6O75586 246 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CELP19835 753 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 GABRA5P31644 462 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 GJA5P36382 358 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PSMB10P40306 273 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CTBP1Q13363 440 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 LEMD1Q68G75 181 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 COQ8BQ96D53 544 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 POT1Q9NUX5 634 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 H7C417 338 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 HCRTR2O43614 444 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 DLK1P80370 383 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 LAPTM4AQ15012 233 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 C3orf38Q5JPI3 329 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 STEAP4Q687X5 459 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 RANBP3LQ86VV4 465 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 HPSE2Q8WWQ2 592 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 P2RY11Q96G91 374 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 LTBP3Q9NS15 1303 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 LOC102723532A0A0G2JNH3 316 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SLC9B1P1A6NJY1 282 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 WNT9AO14904 365 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 LRATO95237 230 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 AHSGP02765 367 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CRYBA1P05813 215 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 G6PDP11413 515 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 GLUD2P49448 558 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 OR7E24Q6IFN5 339 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 POMGNT2Q8NAT1 580 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 C16orf78Q8WTQ4 265 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 LRR1Q96L50 414 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PDE7BQ9NP56 450 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 EXO1Q9UQ84 846 aaKnown RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 YARS2Q9Y2Z4 477 aaKnown RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 ANKRD36A6QL64 1941 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 LOC105369274A0A096LPK9 316 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 AQP8O94778 261 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CLDN9O95484 217 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SFTPBP07988 381 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 YWHAQP27348 245 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CD82P27701 267 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 NTSP30990 170 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 NRG3P56975 720 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CNKSR3Q6P9H4 555 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 MAMDC4Q6UXC1 1216 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 RANBP10Q6VN20 620 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 TMC8Q8IU68 726 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 OR4N4Q8N0Y3 316 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 GAS2L1Q99501 681 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PCED1AQ9H1Q7 454 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SUV39H2Q9H5I1 410 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 MOB1AQ9H8S9 216 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 ABCC13Q9NSE7 274 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF670-ZNF695F2Z2N8 137 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SDHDO14521 159 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PPM1DO15297 605 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 TRAF3IP2O43734 574 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 STK16O75716 305 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 OPN1LWP04000 364 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 ALDOAP04075 364 aaKnown RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 AGXTP21549 392 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 DRD5P21918 477 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 AVPR1BP47901 424 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 CSNK1EP49674 416 aaKnown RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 DAOAP59103 153 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 NXNL2Q5VZ03 156 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SAXO2Q658L1 398 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF627Q7L945 461 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SLC43A2Q8N370 569 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 OR51D1Q8NGF3 324 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF566Q969W8 418 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PHYHIPLQ96FC7 376 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 OR2A14Q96R47 310 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 PKIBQ9C010 78 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 COL5A3P25940 1745 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 BCL9LQ86UU0 1499 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SYN3O14994 580 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 SCAF4O95104 1147 aaKnown RBP4.71□□□□□ -1.66
VPS13D-213ENST00000613099 GNSP15586 552 aa4.71□□□□□ -1.66
VPS13D-213ENST00000613099 DNASE1L1P49184 302 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms