RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 NLGN4YQ8NFZ3 816 aaPredicted RBP6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 OR4K14Q8NGD5 310 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 OR52I1Q8NGK6 324 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 OR2L2Q8NH16 312 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ARRDC3Q96B67 414 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF582Q96NG8 517 aaPredicted RBP6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 OPALINQ96PE5 141 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 DPAGT1Q9H3H5 408 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 GLIPR2Q9H4G4 154 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 SOHLH2Q9NX45 425 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 GNG8Q9UK08 70 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 TMPRSS11EQ9UL52 423 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC7A7Q9UM01 511 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 PARP14Q460N5 1801 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 RLFQ13129 1914 aa6.47□□□□□ -1.37
SYNPO2-206ENST00000610556 C1orf226A1L170 272 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 ZAR1LA6NP61 321 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 PSMD9O00233 223 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 TMPRSS11DO60235 418 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 SCN2BO60939 215 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 HIST1H2ABP04908 130 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 DRD2P14416 443 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF3P17036 446 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 GDI1P31150 447 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 GABRA3P34903 492 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 STAT5AP42229 794 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 KCNJ5P48544 419 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 ERVK-21P61565 698 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 LTB4RQ15722 352 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 NTRK2Q16620 822 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 HNRNPA1L2Q32P51 320 aaKnown RBP6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 EIPR1Q53HC9 387 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 LCTLQ6UWM7 567 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 HIST3H2AQ7L7L0 130 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 ZER1Q7Z7L7 766 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 TMEM150AQ86TG1 271 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 OAFQ86UD1 273 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 PLA2G15Q8NCC3 412 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 BEST4Q8NFU0 473 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 OR8K3Q8NH51 312 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 LILRB4Q8NHJ6 448 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 SNAPC3Q92966 411 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 HIST1H2ACQ93077 130 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 OTUB2Q96DC9 234 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 NEURL3Q96EH8 262 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 PDXPQ96GD0 296 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC41A3Q96GZ6 507 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 NUDT15Q9NV35 164 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 ZSCAN32Q9NX65 697 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 USP36Q9P275 1121 aaKnown RBP6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 ACSL5Q9ULC5 683 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 ARID1AO14497 2285 aa6.46□□□□□ -1.37
SYNPO2-206ENST00000610556 A0A075B6Q4 140 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 A0A1W2PQU0 124 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 HMX3A6NHT5 357 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 SMAD9O15198 467 aaKnown RBP6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 LRRTM2O43300 516 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 SOX30O94993 753 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 SEMA3DO95025 777 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 IL1AP01583 271 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 TYRP1P17643 537 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 F8A1P23610 371 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 STOMP27105 288 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 CD6P30203 668 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 GZMMP51124 257 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 GBX2P52951 348 aaPredicted RBP6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 FXNQ16595 210 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 SYT14P1Q58G82 188 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 SLX4IPQ5VYV7 408 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 FAM83HQ6ZRV2 1179 aaPredicted RBP6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 NRROSQ86YC3 692 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 TMEFF1Q8IYR6 380 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 ELMOD2Q8IZ81 293 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 GATSQ8NAP1 163 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 VN1R2Q8NFZ6 395 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 SETD6Q8TBK2 473 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 LRRC20Q8TCA0 184 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 ADAMTS19Q8TE59 1207 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 PCNPQ8WW12 178 aaKnown RBP6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 AKAP1Q92667 903 aaKnown RBP eCLIP6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 PRRC1Q96M27 445 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 ZSWIM3Q96MP5 696 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 ERMAPQ96PL5 475 aaPredicted RBP6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 PPIL3Q9H2H8 161 aaKnown RBP6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 PLSCR3Q9NRY6 295 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 NTNG1Q9Y2I2 539 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 SPEF1Q9Y4P9 236 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 UBE2QL1A1L167 161 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 FAM171A2A8MVW0 826 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 HEPACAM2A8MVW5 462 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 CHURC1-FNTBB4DL54 471 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 B4GALT2O60909 372 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 CTSLP07711 333 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 CD3GP09693 182 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 PTPN6P29350 595 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 ERP29P30040 261 aaKnown RBP6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 OMPP47874 163 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 AP2S1P53680 142 aaPredicted RBP6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 CDK3Q00526 305 aa6.46□□□□□ -1.38
SYNPO2-206ENST00000610556 RPA4Q13156 261 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms