RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 LILRB4Q8NHJ6 448 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 PIK3R3Q92569 461 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 OTUB1Q96FW1 271 aaPredicted RBP9.72□□□□□ -0.85
TUBE1-210ENST00000604967 C16orf58Q96GQ5 468 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 ZNF764Q96H86 408 aaPredicted RBP9.72□□□□□ -0.85
TUBE1-210ENST00000604967 METTL2AQ96IZ6 378 aaKnown RBP9.72□□□□□ -0.85
TUBE1-210ENST00000604967 COL21A1Q96P44 957 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 LMF2Q9BU23 707 aaKnown RBP9.72□□□□□ -0.85
TUBE1-210ENST00000604967 OSBPL11Q9BXB4 747 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 UGT2B28Q9BY64 529 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 IQCGQ9H095 443 aaKnown RBP9.72□□□□□ -0.85
TUBE1-210ENST00000604967 REEP4Q9H6H4 257 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 MIEF1Q9NQG6 463 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 QPCTLQ9NXS2 382 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 NTMQ9P121 344 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 PRODH2Q9UF12 536 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 MID2Q9UJV3 735 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 MAPRE3Q9UPY8 281 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 PCNX3Q9H6A9 2034 aa9.72□□□□□ -0.85
TUBE1-210ENST00000604967 BCKDKO14874 412 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 RGS16O15492 202 aaPredicted RBP9.71□□□□□ -0.86
TUBE1-210ENST00000604967 PDPK1O15530 556 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 CTIFO43310 598 aaKnown RBP9.71□□□□□ -0.86
TUBE1-210ENST00000604967 SNX4O95219 450 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 ACP2P11117 423 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 BMP7P18075 431 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 BGNP21810 368 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 SMSP52788 366 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 DLX5P56178 289 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 CLDN15P56746 228 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 NRG3P56975 720 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 B3GALT5-AS1P59052 145 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 DCAF7P61962 342 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 ZNF155Q12901 538 aaPredicted RBP9.71□□□□□ -0.86
TUBE1-210ENST00000604967 TBCELQ5QJ74 424 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 BEND6Q5SZJ8 279 aaPredicted RBP9.71□□□□□ -0.86
TUBE1-210ENST00000604967 C6orf163Q5TEZ5 329 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 TMEM198Q66K66 360 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 VASNQ6EMK4 673 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 LARP4Q71RC2 724 aaKnown RBP eCLIP9.71□□□□□ -0.86
TUBE1-210ENST00000604967 MCEMP1Q8IX19 187 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 RIMKLAQ8IXN7 391 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 LIX1Q8N485 282 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 SLC16A11Q8NCK7 471 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 FBXO30Q8TB52 745 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 ZNF524Q96C55 264 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 WDYHV1Q96HA8 205 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 PPP1R36Q96LQ0 422 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 NPAS1Q99742 590 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 ENKD1Q9H0I2 346 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 LDAHQ9H6V9 325 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 METTL7AQ9H8H3 244 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 ATP6V1HQ9UI12 483 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 ACAD8Q9UKU7 415 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 CFL2Q9Y281 166 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 WBP11Q9Y2W2 641 aaKnown RBP9.71□□□□□ -0.86
TUBE1-210ENST00000604967 KCNE3Q9Y6H6 103 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 HCFC1P51610 2035 aa9.71□□□□□ -0.86
TUBE1-210ENST00000604967 HRNRQ86YZ3 2850 aaPredicted RBP9.71□□□□□ -0.86
TUBE1-210ENST00000604967 FAM90A27PA6NNH2 459 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 CAPN14A8MX76 684 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 ANKRD28O15084 1053 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 SCAMP2O15127 329 aaKnown RBP9.7□□□□□ -0.86
TUBE1-210ENST00000604967 TRAPPC6AO75865 159 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 BCAS2O75934 225 aaPredicted RBP9.7□□□□□ -0.86
TUBE1-210ENST00000604967 SERPINE1P05121 402 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 NEFHP12036 1026 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 STARP49675 285 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 TMED10P49755 219 aaKnown RBP9.7□□□□□ -0.86
TUBE1-210ENST00000604967 DIO3P55073 304 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 GFRA1P56159 465 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 ABCE1P61221 599 aaKnown RBP9.7□□□□□ -0.86
TUBE1-210ENST00000604967 PHC1P78364 1004 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 ACSF3Q4G176 576 aaPredicted RBP9.7□□□□□ -0.86
TUBE1-210ENST00000604967 NHSL2Q5HYW2 709 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 C1orf185Q5T7R7 199 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 IL23RQ5VWK5 629 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 SLC30A6Q6NXT4 461 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 PAOXQ6QHF9 649 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 B3GNT6Q6ZMB0 384 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 PACS2Q86VP3 889 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 NUDCD3Q8IVD9 361 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 SAMD14Q8IZD0 417 aaPredicted RBP9.7□□□□□ -0.86
TUBE1-210ENST00000604967 RELL2Q8NC24 303 aaPredicted RBP9.7□□□□□ -0.86
TUBE1-210ENST00000604967 TNIP2Q8NFZ5 429 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 OR1J4Q8NGS1 313 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 PPCDCQ96CD2 204 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 TLCD1Q96CP7 247 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 PGM2Q96G03 612 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 OR2B2Q9GZK3 357 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 PRDM14Q9GZV8 571 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 CENPHQ9H3R5 247 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 SERHL2Q9H4I8 314 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 CXorf36Q9H7Y0 433 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 SSU72Q9NP77 194 aaKnown RBP9.7□□□□□ -0.86
TUBE1-210ENST00000604967 EQTNQ9NQ60 294 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 GIMAP4Q9NUV9 329 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 PNPOQ9NVS9 261 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 ALKBH4Q9NXW9 302 aa9.7□□□□□ -0.86
TUBE1-210ENST00000604967 SH3BP4Q9P0V3 963 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms