RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 DUX4L5P0CJ88 424 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 DUX4L6P0CJ89 424 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 DUX4L7P0CJ90 424 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 HLA-EP13747 358 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 COMTP21964 271 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ABCD3P28288 659 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 FMO3P31513 532 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ICAM3P32942 547 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 PGM1P36871 562 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 OPRL1P41146 370 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ETV6P41212 452 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 COMPP49747 757 aaPredicted RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 NDUFV1P49821 464 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 PRKAA2P54646 552 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 CDH11P55287 796 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 KCNK10P57789 538 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 KRTAP1-1Q07627 177 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 TWF1Q12792 350 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 PDZK1IP1Q13113 114 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 PTPRCAPQ14761 206 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 HLXQ14774 488 aaPredicted RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 OR8G1Q15617 311 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 TBCCQ15814 346 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 NTRK3Q16288 839 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 PARP15Q460N3 678 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 CCDC157Q569K6 752 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 Q5BKY6 102 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 PLEKHS1Q5SXH7 462 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 LPCAT4Q643R3 524 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 DPPA4Q7L190 304 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 SLC46A3Q7Z3Q1 461 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 CACUL1Q86Y37 369 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 CCDC60Q8IWA6 550 aaPredicted RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 RHOT1Q8IXI2 618 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 CFAP206Q8IYR0 622 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ZFP82Q8N141 532 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 CDYL2Q8N8U2 506 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ZNF383Q8NA42 475 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 AQP11Q8NBQ7 271 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 RDM1Q8NG50 284 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 OR10H4Q8NGA5 316 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 OR13C9Q8NGT0 318 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 DNAJB14Q8TBM8 379 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 TRMT10AQ8TBZ6 339 aaKnown RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 DCAF4Q8WV16 495 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ASB5Q8WWX0 329 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 GCDHQ92947 438 aaPredicted RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 FAF2Q96CS3 445 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 RNF125Q96EQ8 232 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 HYLS1Q96M11 299 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ZNF512Q96ME7 567 aaPredicted RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 SLC38A2Q96QD8 506 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 OR5B2Q96R09 309 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 MCCC1Q96RQ3 725 aaPredicted RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 PLEKHF1Q96S99 279 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 RBBP8Q99708 897 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 CMKLR1Q99788 373 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 OMDQ99983 421 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 KLHDC3Q9BQ90 382 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 SLC35A5Q9BS91 424 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 PIMREGQ9BSJ6 248 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 NAA11Q9BSU3 229 aaPredicted RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 MED10Q9BTT4 135 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 CACNG6Q9BXT2 260 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ROPN1BQ9BZX4 212 aaPredicted RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ROGDIQ9GZN7 287 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 DCSTAMPQ9H295 470 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 SLC38A1Q9H2H9 487 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ROPN1Q9HAT0 212 aaPredicted RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 POPDC2Q9HBU9 364 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 POLE4Q9NR33 117 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 MBNL1Q9NR56 388 aaKnown RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 FAM49BQ9NUQ9 324 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 FAM118AQ9NWS6 357 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 USE1Q9NZ43 259 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 GSKIPQ9P0R6 139 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ANKFY1Q9P2R3 1169 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 DUX4Q9UBX2 424 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ARMCX3Q9UH62 379 aaPredicted RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 SLC25A13Q9UJS0 675 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ANAPC7Q9UJX3 599 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 SNX12Q9UMY4 172 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 STUB1Q9UNE7 303 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ICKQ9UPZ9 632 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 TBL2Q9Y4P3 447 aaKnown RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 HEMK1Q9Y5R4 338 aaPredicted RBP5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 PTCH1Q13635 1447 aa5.48□□□□□ -1.53
LSM1P2-201ENST00000604911 ERVK-7P63135 1459 aa5.47□□□□□ -1.53
LSM1P2-201ENST00000604911 LRRC9Q6ZRR7 1453 aa5.47□□□□□ -1.53
LSM1P2-201ENST00000604911 SAC3D1A6NKF1 404 aa5.47□□□□□ -1.53
LSM1P2-201ENST00000604911 C4orf47A7E2U8 309 aa5.47□□□□□ -1.53
LSM1P2-201ENST00000604911 CDRT15L2A8MXV6 281 aa5.47□□□□□ -1.53
LSM1P2-201ENST00000604911 KLRC4-KLRK1H3BQV0 150 aa5.47□□□□□ -1.53
LSM1P2-201ENST00000604911 K7EQM0 130 aa5.47□□□□□ -1.53
LSM1P2-201ENST00000604911 HAS3O00219 553 aa5.47□□□□□ -1.53
LSM1P2-201ENST00000604911 TP53I11O14683 189 aa5.47□□□□□ -1.53
LSM1P2-201ENST00000604911 RGS16O15492 202 aaPredicted RBP5.47□□□□□ -1.53
LSM1P2-201ENST00000604911 OR10H2O60403 315 aa5.47□□□□□ -1.53
LSM1P2-201ENST00000604911 RAMP3O60896 148 aa5.47□□□□□ -1.53
LSM1P2-201ENST00000604911 ENTPD3O75355 529 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms