RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 TMEM81Q6P7N7 255 aa15.95■□□□□ 0.14
SHKBP1-223ENST00000600552 AAGABQ6PD74 315 aa15.95■□□□□ 0.14
SHKBP1-223ENST00000600552 PAMR1Q6UXH9 720 aa15.95■□□□□ 0.14
SHKBP1-223ENST00000600552 FAM9CQ8IZT9 166 aa15.95■□□□□ 0.14
SHKBP1-223ENST00000600552 OR7G2Q8NG99 324 aa15.95■□□□□ 0.14
SHKBP1-223ENST00000600552 ZNF675Q8TD23 568 aa15.95■□□□□ 0.14
SHKBP1-223ENST00000600552 DSN1Q9H410 356 aa15.95■□□□□ 0.14
SHKBP1-223ENST00000600552 MID1IP1Q9NPA3 183 aa15.95■□□□□ 0.14
SHKBP1-223ENST00000600552 PPP4R1LQ9P1A2 415 aa15.95■□□□□ 0.14
SHKBP1-223ENST00000600552 TBK1Q9UHD2 729 aa15.95■□□□□ 0.14
SHKBP1-223ENST00000600552 GMFGO60234 142 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 TSPAN2O60636 221 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 ABCB7O75027 752 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 CRCPO75575 148 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 RCBTB2O95199 551 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 GCAP28676 217 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 MPIP34949 423 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 NCBP2P52298 156 aaKnown RBP eCLIP15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 GFRA1P56159 465 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 IMPG1Q17R60 797 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 GBP7Q8N8V2 638 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 CNEP1R1Q8N9A8 125 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 OR5M1Q8NGP8 315 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 WNT2BQ93097 391 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 SLC35A4Q96G79 324 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 VSTM2LQ96N03 204 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 BTBD9Q96Q07 612 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 SFXN3Q9BWM7 321 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 JKAMPQ9P055 326 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 MED11Q9P086 117 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 NF1P21359 2839 aa15.94■□□□□ 0.14
SHKBP1-223ENST00000600552 SH3D21A4FU49 640 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 CCDC151A5D8V7 595 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 ATE1O95260 518 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 TGM6O95932 706 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 PYGBP11216 843 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 HK1P19367 917 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 PRKAA2P54646 552 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 DIO3P55073 304 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 PKNOX1P55347 436 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 SIRPAP78324 504 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 ADAM8P78325 824 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 SORDQ00796 357 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 LCP2Q13094 533 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 PRSS53Q2L4Q9 553 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 GLE1Q53GS7 698 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 RAET1LQ5VY80 246 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 TMEM107Q6UX40 140 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 TIFABQ6ZNK6 161 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 SLC22A9Q8IVM8 553 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 SAMD14Q8IZD0 417 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 G6PC3Q9BUM1 346 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 MIEF1Q9NQG6 463 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 TAS2R9Q9NYW1 312 aa15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 POLR3HQ9Y535 204 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-223ENST00000600552 NAV3Q8IVL0 2385 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 SEC14L5O43304 696 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 ZIC3O60481 467 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 ENO1P06733 434 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 MC3RP41968 323 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 PNLIPRP2P54317 469 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 FOXA1P55317 472 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 CLDN18P56856 261 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 MRPS22P82650 360 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 DEFB113Q30KQ7 82 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 PPP4R4Q6NUP7 873 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 Q71RC1 249 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 CAMKMTQ7Z624 323 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 SMPDL3BQ92485 455 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 DTNBP1Q96EV8 351 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 ZFP3Q96NJ6 502 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 FAM111AQ96PZ2 611 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 ALPK1Q96QP1 1244 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 SHCBP1LQ9BZQ2 653 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 ACBD3Q9H3P7 528 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 FLRT3Q9NZU0 649 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 CLCF1Q9UBD9 225 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 NDRG3Q9UGV2 375 aa15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 EIF3LQ9Y262 564 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-223ENST00000600552 PCNX3Q9H6A9 2034 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 A0A1W2PNV4 684 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 RIPK2O43353 540 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 PLOD3O60568 738 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 COQ9O75208 318 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 GSTA1P08263 222 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 ZNF708P17019 499 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 EVI2BP34910 448 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 FAM27E3Q08E93 113 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 GAB1Q13480 694 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 WFDC11Q8NEX6 87 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 ERP27Q96DN0 273 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 POM121Q96HA1 1249 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 PIGMQ9H3S5 423 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 PLEKHF2Q9H8W4 249 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 NEUROD4Q9HD90 331 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 PACSIN3Q9UKS6 424 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 STK38LQ9Y2H1 464 aa15.91■□□□□ 0.14
SHKBP1-223ENST00000600552 SLC22A20A6NK97 555 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 B4DXG7 233 aa15.9■□□□□ 0.14
SHKBP1-223ENST00000600552 H0YC42 278 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms