RNA–Protein interactions for RNA: ENST00000598355.1

TRIM28-213, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-213ENST00000598355 MAPRE3Q9UPY8 281 aa14.76□□□□□ -0.05
TRIM28-213ENST00000598355 C15orf41Q9Y2V0 281 aa14.76□□□□□ -0.05
TRIM28-213ENST00000598355 MEMO1Q9Y316 297 aa14.76□□□□□ -0.05
TRIM28-213ENST00000598355 HRH3Q9Y5N1 445 aa14.76□□□□□ -0.05
TRIM28-213ENST00000598355 UNC79Q9P2D8 2635 aa14.76□□□□□ -0.05
TRIM28-213ENST00000598355 E9PLN8 166 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 CCL21O00585 134 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 PRRG2O14669 202 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 HDAC3O15379 428 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 ICOSLGO75144 302 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 NKX2-2O95096 273 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 GP1BBP13224 206 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 PTPN6P29350 595 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 GAS1P54826 345 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 CASP6P55212 293 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 ADORA2A-AS1P86434 159 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 EFR3AQ14156 821 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 TMEM198Q66K66 360 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 TIGD3Q6B0B8 471 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 MFSD12Q6NUT3 480 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 NUDT8Q8WV74 236 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 TESCQ96BS2 214 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 FAM120BQ96EK7 910 aaKnown RBP14.75□□□□□ -0.05
TRIM28-213ENST00000598355 PPP1R36Q96LQ0 422 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 VKORC1Q9BQB6 163 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 METTL7AQ9H8H3 244 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 MANSC1Q9H8J5 431 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 NEUROD4Q9HD90 331 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 B4GALT7Q9UBV7 327 aa14.75□□□□□ -0.05
TRIM28-213ENST00000598355 PLEKHB1Q9UF11 243 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-213ENST00000598355 A0A1W2PRB8 838 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 SLCO1B7G3V0H7 640 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 EMC8O43402 210 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 REM1O75628 298 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 HPNP05981 417 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 ALDOCP09972 364 aaKnown RBP14.74□□□□□ -0.05
TRIM28-213ENST00000598355 LBPP18428 481 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 GPC1P35052 558 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 WNT3P56703 355 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 GAB1Q13480 694 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 SLC10A1Q14973 349 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 ZNHIT3Q15649 155 aaPredicted RBP14.74□□□□□ -0.05
TRIM28-213ENST00000598355 CPTPQ5TA50 214 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 ZCCHC12Q6PEW1 402 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 RPTNQ6XPR3 784 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 MAMDC2Q7Z304 686 aaPredicted RBP14.74□□□□□ -0.05
TRIM28-213ENST00000598355 MAVSQ7Z434 540 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 WDR53Q7Z5U6 358 aaPredicted RBP14.74□□□□□ -0.05
TRIM28-213ENST00000598355 PACS2Q86VP3 889 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 CDRT4Q8N9R6 151 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 NUP43Q8NFH3 380 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 OR8J2Q8NGG1 315 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 CEP70Q8NHQ1 597 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 NEIL3Q8TAT5 605 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 OR5P2Q8WZ92 322 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 TMCO6Q96DC7 493 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 ADOQ96SZ5 270 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 GALNT9Q9HCQ5 603 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 Q9N2J8 555 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 SPRR3Q9UBC9 169 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 SUCOQ9UBS9 1254 aaKnown RBP14.74□□□□□ -0.05
TRIM28-213ENST00000598355 SH3BGRL2Q9UJC5 107 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 CBLCQ9ULV8 474 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 OR10H1Q9Y4A9 318 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 PCDHGB3Q9Y5G1 929 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 WIF1Q9Y5W5 379 aa14.74□□□□□ -0.05
TRIM28-213ENST00000598355 TRGV5A0A0B4J1U4 118 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 HMGB1P1B2RPK0 211 aaPredicted RBP14.73□□□□□ -0.05
TRIM28-213ENST00000598355 B4DXG7 233 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 ZNF195O14628 629 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 BCKDKO14874 412 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 SCN2BO60939 215 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 SASH3O75995 380 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 PDE9AO76083 593 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 IL33O95760 270 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 ACP2P11117 423 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 CYP4B1P13584 511 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 EFNA1P20827 205 aaPredicted RBP14.73□□□□□ -0.05
TRIM28-213ENST00000598355 AGAP20933 346 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 IL12BP29460 328 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 KRT20P35900 424 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 MRPS22P82650 360 aaKnown RBP14.73□□□□□ -0.05
TRIM28-213ENST00000598355 PRR5P85299 388 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 WDR75Q8IWA0 830 aaKnown RBP14.73□□□□□ -0.05
TRIM28-213ENST00000598355 ZNF808Q8N4W9 903 aaPredicted RBP14.73□□□□□ -0.05
TRIM28-213ENST00000598355 WDSUB1Q8N9V3 476 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 SFXN5Q8TD22 340 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 ZNF75CPQ92670 426 aaPredicted RBP14.73□□□□□ -0.05
TRIM28-213ENST00000598355 EFHD2Q96C19 240 aaPredicted RBP14.73□□□□□ -0.05
TRIM28-213ENST00000598355 GNRHR2Q96P88 292 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 PRPF18Q99633 342 aaKnown RBP14.73□□□□□ -0.05
TRIM28-213ENST00000598355 DUSP26Q9BV47 211 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 SLC6A15Q9H2J7 730 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 TP63Q9H3D4 680 aaPredicted RBP14.73□□□□□ -0.05
TRIM28-213ENST00000598355 CXorf36Q9H7Y0 433 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 C3orf14Q9HBI5 128 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 AIG1Q9NVV5 245 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 GIN1Q9NXP7 522 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 KLRF1Q9NZS2 232 aa14.73□□□□□ -0.05
TRIM28-213ENST00000598355 ABCG2Q9UNQ0 655 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms