RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 NINQ8N4C6 2090 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 ANKRD28O15084 1053 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 TO15178 435 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 ATP8B1O43520 1251 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 SLC22A3O75751 556 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 TGDSO95455 350 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 HMGN2P05204 90 aaKnown RBP10.17□□□□□ -0.78
LIG1-211ENST00000596457 VIMP08670 466 aaKnown RBP10.17□□□□□ -0.78
LIG1-211ENST00000596457 ALOX5P09917 674 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 ACP2P11117 423 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 IDO1P14902 403 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 NAGAP17050 411 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 CASP3P42574 277 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 MAGEA5P43359 124 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 PRIM2P49643 509 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 CASP9P55211 416 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 WNT3P56703 355 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 C21orf58P58505 322 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 STX1BP61266 288 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 HBA1P69905 142 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 PHC1P78364 1004 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 GUCY1A3Q02108 690 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 RBPJQ06330 500 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 LASP1Q14847 261 aaKnown RBP10.17□□□□□ -0.78
LIG1-211ENST00000596457 TOMM20Q15388 145 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 DECR1Q16698 335 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 GSTA3Q16772 222 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 ANXA8L1Q5VT79 327 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 SLC22A16Q86VW1 577 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 CDRT4Q8N9R6 151 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 ZFP62Q8NB50 900 aaPredicted RBP10.17□□□□□ -0.78
LIG1-211ENST00000596457 RFWD2Q8NHY2 731 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 HGDQ93099 445 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 TESCQ96BS2 214 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 TMCO6Q96DC7 493 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 RMND5BQ96G75 393 aaPredicted RBP10.17□□□□□ -0.78
LIG1-211ENST00000596457 GPR137Q96N19 417 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 RILPQ96NA2 401 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 MS4A4EQ96PG1 132 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 LMF2Q9BU23 707 aaKnown RBP10.17□□□□□ -0.78
LIG1-211ENST00000596457 LDAHQ9H6V9 325 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 EXO5Q9H790 373 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 IL1RL2Q9HB29 575 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 PROK2Q9HC23 129 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 GALNT9Q9HCQ5 603 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 SH2D2AQ9NP31 389 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 NPHS2Q9NP85 383 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 DCTN4Q9UJW0 460 aa10.17□□□□□ -0.78
LIG1-211ENST00000596457 BOKQ9UMX3 212 aaPredicted RBP10.17□□□□□ -0.78
LIG1-211ENST00000596457 FAF1Q9UNN5 650 aaPredicted RBP10.17□□□□□ -0.78
LIG1-211ENST00000596457 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 TRGV8A0A0C4DH27 118 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 PRSS51A0A1B0GVH4 220 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 RNASET2O00584 256 aaKnown RBP10.16□□□□□ -0.78
LIG1-211ENST00000596457 SCO2O43819 266 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 TSPAN2O60636 221 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 EDF1O60869 148 aaKnown RBP10.16□□□□□ -0.78
LIG1-211ENST00000596457 ICOSLGO75144 302 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 KCNH1O95259 989 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 PSMG1O95456 288 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 RFPL3SP0C7P2 107 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 CYP4B1P13584 511 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 NCF2P19878 526 aaPredicted RBP10.16□□□□□ -0.78
LIG1-211ENST00000596457 GDF1P27539 372 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 PNLIPRP2P54317 469 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 EFR3AQ14156 821 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 VPS26BQ4G0F5 336 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 CYP27C1Q4G0S4 372 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 PDCD4Q53EL6 469 aaKnown RBP10.16□□□□□ -0.78
LIG1-211ENST00000596457 KRTCAP3Q53RY4 240 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 MFSD12Q6NUT3 480 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 FIGNL1Q6PIW4 674 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 PAOXQ6QHF9 649 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 ANGPTL8Q6UXH0 198 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 C6orf120Q7Z4R8 191 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 CAMKMTQ7Z624 323 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 PACS2Q86VP3 889 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 SIAH3Q8IW03 269 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 GHDCQ8N2G8 530 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 MIER2Q8N344 545 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 TMEM251Q8N6I4 163 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 SLC16A11Q8NCK7 471 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 OR8J2Q8NGG1 315 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 OR56A1Q8NGH5 318 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 ADAMTS15Q8TE58 950 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 GIMAP5Q96F15 307 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 ZNF597Q96LX8 424 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 OR52E6Q96RD3 313 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 CCDC28BQ9BUN5 200 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 OSBPL11Q9BXB4 747 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 ANGPTL4Q9BY76 406 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 ZFP64Q9NPA5 681 aa10.16□□□□□ -0.78
LIG1-211ENST00000596457 MRTO4Q9UKD2 239 aaKnown RBP10.16□□□□□ -0.78
LIG1-211ENST00000596457 NUP214P35658 2090 aaPredicted RBP10.15□□□□□ -0.78
LIG1-211ENST00000596457 A0A0G2JND7 137 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 RNF103-CHMP3A0A140T963 221 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 A0A1B0GTH9 108 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 PRAMEF25A6NGN4 478 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 OR6C70A6NIJ9 312 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 TTC36A6NLP5 189 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms