RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 GAS1P54826 345 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 NUP107P57740 925 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 ABCE1P61221 599 aaKnown RBP11.91□□□□□ -0.5
USE1-207ENST00000596136 MRPS22P82650 360 aaKnown RBP11.91□□□□□ -0.5
USE1-207ENST00000596136 CRYZQ08257 329 aaKnown RBP11.91□□□□□ -0.5
USE1-207ENST00000596136 PMPCAQ10713 525 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 GAB1Q13480 694 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 CHI3L2Q15782 390 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 ATP6AP1LQ52LC2 224 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 BEND6Q5SZJ8 279 aaPredicted RBP11.91□□□□□ -0.5
USE1-207ENST00000596136 VASNQ6EMK4 673 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 ANKRD26P1Q6NSI1 321 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 LARP4Q71RC2 724 aaKnown RBP eCLIP11.91□□□□□ -0.5
USE1-207ENST00000596136 WDSUB1Q8N9V3 476 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 LILRB4Q8NHJ6 448 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 AGR3Q8TD06 166 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 ASB5Q8WWX0 329 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 RND1Q92730 232 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 CIDECQ96AQ7 238 aaPredicted RBP11.91□□□□□ -0.5
USE1-207ENST00000596136 SDCCAG3Q96C92 435 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 TIMP4Q99727 224 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 TTYH2Q9BSA4 534 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 C20orf27Q9GZN8 174 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 GALNT9Q9HCQ5 603 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 ASIC5Q9NY37 505 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 TNFRSF10DQ9UBN6 386 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 GIMAP2Q9UG22 337 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 MRPS18CQ9Y3D5 142 aaKnown RBP11.91□□□□□ -0.5
USE1-207ENST00000596136 RAP2CQ9Y3L5 183 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 LRBAP50851 2863 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 GNB5O14775 395 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 SCAMP2O15127 329 aaKnown RBP11.9□□□□□ -0.5
USE1-207ENST00000596136 FADS1O60427 444 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 HSPA4LO95757 839 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 GLI4P10075 376 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 DDX5P17844 614 aaKnown RBP11.9□□□□□ -0.5
USE1-207ENST00000596136 CHRNB4P30926 498 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 KRT20P35900 424 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 RPL3P39023 403 aaKnown RBP11.9□□□□□ -0.5
USE1-207ENST00000596136 TRPC1P48995 793 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 SLC18A1P54219 525 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 MANFP55145 182 aaKnown RBP11.9□□□□□ -0.5
USE1-207ENST00000596136 C21orf58P58505 322 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 EMX2Q04743 252 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 ZNF155Q12901 538 aaPredicted RBP11.9□□□□□ -0.5
USE1-207ENST00000596136 HSPB3Q12988 150 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 EXOSC6Q5RKV6 272 aaKnown RBP11.9□□□□□ -0.5
USE1-207ENST00000596136 ZNF585AQ6P3V2 769 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 ANGPTL8Q6UXH0 198 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 B3GNT6Q6ZMB0 384 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 PLCZ1Q86YW0 608 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 RIMKLAQ8IXN7 391 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 ULK2Q8IYT8 1036 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 KIRREL3Q8IZU9 778 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 LIX1Q8N485 282 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 NATD1Q8N6N6 113 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 CEP70Q8NHQ1 597 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 CLHC1Q8NHS4 586 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 ZFP28Q8NHY6 868 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 PSMA8Q8TAA3 256 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 PPP1R14CQ8TAE6 165 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 COQ8BQ96D53 544 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 GIMAP5Q96F15 307 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 SORT1Q99523 831 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 TREX2Q9BQ50 279 aaPredicted RBP11.9□□□□□ -0.5
USE1-207ENST00000596136 OR2B2Q9GZK3 357 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 PRDM14Q9GZV8 571 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 EXO5Q9H790 373 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 ZNF395Q9H8N7 513 aaPredicted RBP11.9□□□□□ -0.5
USE1-207ENST00000596136 KLRF1Q9NZS2 232 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 SH3BP4Q9P0V3 963 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 CBLCQ9ULV8 474 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 RNF6Q9Y252 685 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 OR10H1Q9Y4A9 318 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 WIF1Q9Y5W5 379 aa11.9□□□□□ -0.5
USE1-207ENST00000596136 INTS1Q8N201 2190 aaKnown RBP11.89□□□□□ -0.51
USE1-207ENST00000596136 HCFC1P51610 2035 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 WDR91A4D1P6 747 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 C2orf72A6NCS6 295 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 AHRRA9YTQ3 701 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 ERLIN1O75477 346 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 SKAP2O75563 359 aaPredicted RBP11.89□□□□□ -0.51
USE1-207ENST00000596136 TRAPPC6AO75865 159 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 NKX2-2O95096 273 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 IL33O95760 270 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 MYZAPP0CAP1 466 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 CYP4B1P13584 511 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 IL12BP29460 328 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 KIR3DL1P43629 444 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 SLC1A6P48664 564 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 RPL14P50914 215 aaKnown RBP11.89□□□□□ -0.51
USE1-207ENST00000596136 MAD2L1Q13257 205 aaPredicted RBP11.89□□□□□ -0.51
USE1-207ENST00000596136 PTGR1Q14914 329 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 ZNHIT3Q15649 155 aaPredicted RBP11.89□□□□□ -0.51
USE1-207ENST00000596136 DECR1Q16698 335 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 EIPR1Q53HC9 387 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 C1orf185Q5T7R7 199 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 IL23RQ5VWK5 629 aa11.89□□□□□ -0.51
USE1-207ENST00000596136 ZCCHC12Q6PEW1 402 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms