RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ABCB1P08183 1280 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 PTGDSP41222 190 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 SSR2P43308 183 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 CCNG1P51959 295 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 RPS13P62277 151 aaKnown RBP12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 TRAF3Q13114 568 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 ETFDHQ16134 617 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 CPSF6Q16630 551 aaKnown RBP eCLIP12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 AP5B1Q2VPB7 878 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 ALKBH2Q6NS38 261 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 DNM1P46Q6ZS02 220 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 RPS27LQ71UM5 84 aaKnown RBP12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 LCA5Q86VQ0 697 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 IFNEQ86WN2 208 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 WFDC8Q8IUA0 241 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 WDSUB1Q8N9V3 476 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 LILRB1Q8NHL6 650 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 RAB3IL1Q8TBN0 382 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 GTPBP3Q969Y2 492 aaKnown RBP12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 TP53INP1Q96A56 240 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 REPS1Q96D71 796 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 ZNF845Q96IR2 970 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 TMEM204Q9BSN7 226 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 NTMT1Q9BV86 223 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 OR2B2Q9GZK3 357 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 ANKZF1Q9H8Y5 726 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 TMEM216Q9P0N5 145 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 TBK1Q9UHD2 729 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 GDF2Q9UK05 429 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 LIPT1Q9Y234 373 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 DLGAP4Q9Y2H0 992 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 SLC22A20A6NK97 555 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 H0YC42 278 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 SPRY1O43609 319 aaPredicted RBP12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 CBR3O75828 277 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 SHBGP04278 402 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 ZNF708P17019 499 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 ABCD3P28288 659 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 ARL1P40616 181 aaPredicted RBP12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 RAP1GDS1P52306 607 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 TPD52P55327 224 aaPredicted RBP12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 PHEXP78562 749 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 NNATQ16517 81 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 SPRED3Q2MJR0 410 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 GGTA1PQ4G0N0 100 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 HLA-DQA1Q5Y7H0 255 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 OR4C11Q6IEV9 310 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 OR2A2Q6IF42 318 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 IL17RELQ6ZVW7 336 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 UBQLNLQ8IYU4 475 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 ACMSDQ8TDX5 336 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 ZNF483Q8TF39 744 aaPredicted RBP12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 UBLCP1Q8WVY7 318 aaPredicted RBP12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 ROBO4Q8WZ75 1007 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 TANKQ92844 425 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 NEUROG1Q92886 237 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 ATP6V1E2Q96A05 226 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 ADIPOR1Q96A54 375 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 C1QTNF3Q9BXJ4 246 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 ZNF717Q9BY31 904 aaPredicted RBP12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 EXO1Q9UQ84 846 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 MAGED1Q9Y5V3 778 aaPredicted RBP12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 ALPK2Q86TB3 2170 aa12.37□□□□□ -0.43
SHKBP1-208ENST00000595726 IGHV4-30-2A0A087WSY4 118 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 GOLGA8RI6L899 631 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 FOXE1O00358 373 aaPredicted RBP12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 GPR75O95800 540 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 CT62P0C5K7 136 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 PTX3P26022 381 aaPredicted RBP12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 TMED10P49755 219 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 NEK2P51955 445 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 ARFIP1P53367 373 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 HNRNPH2P55795 449 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 NRG3P56975 720 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 RPP38P78345 283 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 FAPQ12884 760 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 CUL3Q13618 768 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 SCIMPQ6UWF3 145 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 GPR180Q86V85 440 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 CNPY4Q8N129 248 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 ZCCHC7Q8N3Z6 543 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 ZNF615Q8N8J6 731 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 OR4F6Q8NGB9 312 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 HGDQ93099 445 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 CAVIN3Q969G5 261 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 RGMAQ96B86 450 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 SFXN2Q96NB2 322 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 CENPKQ9BS16 269 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 OSBPL11Q9BXB4 747 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 NXF5Q9H1B4 397 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 EHD3Q9NZN3 535 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 FBXL2Q9UKC9 423 aa12.36□□□□□ -0.43
SHKBP1-208ENST00000595726 A0A096LNT2 108 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 PPP6CO00743 305 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 EMC8O43402 210 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 ZNF500O60304 480 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 GSTA1P08263 222 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 DANCRP0C864 163 aa12.35□□□□□ -0.43
SHKBP1-208ENST00000595726 CD8BP10966 210 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms