RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 SUV39H2Q9H5I1 410 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 DHX35Q9H5Z1 703 aaKnown RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 SMURF2Q9HAU4 748 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 CISHQ9NSE2 258 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 TMEM30AQ9NV96 361 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 FZD10Q9ULW2 581 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 MRPS2Q9Y399 296 aaKnown RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 COL4A6Q14031 1691 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 PRAMEF33A0A0G2JMD5 474 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 UBA6A0AVT1 1052 aaPredicted RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 A4D1N5 150 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 NPIPB9F8W1W9 429 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 ADAM10O14672 748 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 TERTO14746 1132 aaKnown RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 TXNL1O43396 289 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 TGM5O43548 720 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 TPST2O60704 377 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 PRAMEF10O60809 474 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 ALDH1A1P00352 501 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 SERPINA3P01011 423 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 ERVK-10P10266 1014 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 CCL5P13501 91 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 HGFP14210 728 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 HTR2AP28223 471 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 GABRA5P31644 462 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 S100A11P31949 105 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 CRYBB2P43320 205 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 SLC11A1P49279 550 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 STK19P49842 368 aaPredicted RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 LIG4P49917 911 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 DAPP51397 102 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 AKR1D1P51857 326 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 RIDAP52758 137 aaKnown RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 PLK1P53350 603 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 OR4D2P58180 307 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 LSM3P62310 102 aaKnown RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 SCAPQ12770 1279 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 COTL1Q14019 142 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 FGFBP1Q14512 234 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 PTPRRQ15256 657 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 ZNF239Q16600 458 aaKnown RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 NDUFA9Q16795 377 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 MEP1BQ16820 701 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 DUOXA2Q1HG44 320 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 MPEG1Q2M385 716 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 FAM171A1Q5VUB5 890 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 ANKS6Q68DC2 871 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 ABHD13Q7L211 337 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 FJX1Q86VR8 437 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 TPRA1Q86W33 373 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 ZDHHC21Q8IVQ6 265 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 CRIPAKQ8N1N5 446 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 DTX3Q8N9I9 347 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 BEND2Q8NDZ0 799 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 TFAP2BQ92481 460 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 UPRTQ96BW1 309 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 ELP4Q96EB1 424 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 SLC46A1Q96NT5 459 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 TRIM2Q9C040 744 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 RNF208Q9H0X6 261 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 METTL9Q9H1A3 318 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 REEP4Q9H6H4 257 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 CARS2Q9HA77 564 aaKnown RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 FBRSQ9HAH7 460 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 PLEKHA1Q9HB21 404 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 THSD1Q9NS62 852 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 EVA1BQ9NVM1 165 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 NLE1Q9NVX2 485 aaPredicted RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 ST3GAL5Q9UNP4 418 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 PPIEQ9UNP9 301 aaKnown RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 CLCA2Q9UQC9 943 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 SCN1AP35498 2009 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 C17orf102A2RUQ5 167 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 C1orf196B1AJZ1 125 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 KERAO60938 352 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 NDUFS6O75380 124 aaKnown RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 SCO1O75880 301 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 LINC00614P0C842 121 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 PAX1P15863 534 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 EN2P19622 333 aaPredicted RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 S1PR1P21453 382 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 PRPH2P23942 346 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 LMO2P25791 158 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 MAS1LP35410 378 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 THPOP40225 353 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 GEMP55040 296 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 TRA2BP62995 288 aaKnown RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 IRF9Q00978 393 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 C2orf80Q0P641 193 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 CHAF1BQ13112 559 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 BIKQ13323 160 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 PCBP2Q15366 365 aaKnown RBP eCLIP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 UNC50Q53HI1 259 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 NCBP2-AS2Q69YL0 99 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 IL34Q6ZMJ4 242 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 QSOX2Q6ZRP7 698 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 TMEM173Q86WV6 379 aaPredicted RBP4.13□□□□□ -1.75
LRIT3-202ENST00000594814 SLC34A3Q8N130 599 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 PXT1Q8NFP0 134 aa4.13□□□□□ -1.75
LRIT3-202ENST00000594814 FAM216AQ8WUB2 273 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms